Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1131 |
Symbol | |
ID | 8383406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1106427 |
End bp | 1107227 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644972190 |
Product | zinc finger SWIM domain protein |
Protein accession | YP_003130040 |
Protein GI | 257052207 |
COG category | [S] Function unknown |
COG ID | [COG4715] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCG ACGAGGCATG GATCCGAGAT CGGTGTACCG ACGCGGTGTT CGAACGCGGG CAGCACTATC GAACCGACGG CCGGATCCGC CGAATCGATC GATTCGGCGA TGTCGTTACG GCGATCGTTC AGGGATCAAG TCAGTACGAC GTAACCGTCG AACTAGACGA ATCCAACATC GAGTCACGAT GTACGTGTCC CTACGACGGC CCGGGCGACT GCAAGCACGT CGTGGCAGTC CTGCTGGAGA TCGCTGCTGA CCCGCCAGCG GACGACAGCG AGCGCGTCAC GGCGGTGCTC GACGATGTCT CGCCCGCGGA CCTGCGGGCG TTCGTTCGCG CCGTGCTCGC TGAACGGCCA GCCCTCCGGG ATCGGTTTCT TGCCCGGTAC GGCGACGCTG CGGTCTCGTT CGAAGAACTT CGGGACGAGA TCGAGGCGCT GTTCGACCAG TACACACAGG ACCACCCGGC CGTCACGGAC GCGATCGACT TCTGGCGGTT CTTCGAGATG GCAGAGCGAT ACCGCGAGCG GGACCGTCAT TTCGCGGCCG CAGCCGTTTA CCGCGCGATT TTCACGGCGA TCGACGAGAA CGAGGGACGG ATCGACGGTG CGTACGATCA CCACGCCCGG GCGCTTCAGT CCGCGCTCGA TGGGTACGTC GACTGTGTCA TCGCGGCCGA TCTCGACCAA GAGAGGTTCG AGACGTACGC CGGCGTGCTG GCGGAGCTGT CGAGTGCTGG TTCGCCGGTC AACGACGAGC GATTCCGCCG TGCGCTCGAG GAGCTTGAAG AGCGACGGTA G
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Protein sequence | MQIDEAWIRD RCTDAVFERG QHYRTDGRIR RIDRFGDVVT AIVQGSSQYD VTVELDESNI ESRCTCPYDG PGDCKHVVAV LLEIAADPPA DDSERVTAVL DDVSPADLRA FVRAVLAERP ALRDRFLARY GDAAVSFEEL RDEIEALFDQ YTQDHPAVTD AIDFWRFFEM AERYRERDRH FAAAAVYRAI FTAIDENEGR IDGAYDHHAR ALQSALDGYV DCVIAADLDQ ERFETYAGVL AELSSAGSPV NDERFRRALE ELEERR
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