Gene Huta_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1060 
Symbol 
ID8383334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1032014 
End bp1033111 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content62% 
IMG OID644972125 
ProductProtein of unknown function DUF1616 
Protein accessionYP_003129976 
Protein GI257052143 
COG category[S] Function unknown 
COG ID[COG4743] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACG GGTCAGACTG GCGATTACTG TTACCCGAGA ACGTTCGGCG CTTGCCGTTC 
GATCTCGCGT TCGTGTTCGC GTTCGTCGGC GCCGTCAACC TCTCCGTGTT TCTTCCGTTC
GTCCAGGACA CCCCTCTTCG TGTCGTGTTC GGCCTTCCGT TCGTGCTGTT CATTCCTGGG
TACGCATTCA TCGCGGCACT GTTCCCGGAA CGTGGACAAC GGGCTGTCGA CACCGAGGAC
ACGGCCGATG AATCACACGC CGCTCCGTCC ACGGCCGAGG GTGGAATCGA CGGCATCGAA
CGTGTCGCCC TTTCGTTCGG GTTGAGTATC GCCATCGTTC CCCTGCTCGG ACTGGTCCTC
AATTTCACGC CGTTCGGAAT CCGGCTCGTC CCGATCATGG TGACGGTGAG CATATTCACT
ATCGTGACCG GGGCAATCGC AGCCTACCGA CGCCAGGAAC TGCCGCCGGA AGAACGCTTT
CGAGTTCCAT ACCGCCAGTG GATCGACAGT GCGGGCGAAG AACTGTTCGA ACCGAACAGC
CGGACGGACG CTGCGTTGAA TGTCTTGCTC GTCATTAGTA TTCTGCTCGC GACAGCGAGT
GTGGCCTACG CCGTCGCCGT CCCGAAACAG GGCGAAGCGT TCACTGAAGC GTACCTGCTG
ACGGAATCCG ACGATGGCGA CCTCGTTGCG GACAACTATC CGACGAACTT CACCGTCGGC
GAACCCCAGT CACTGCTCGT CGGCGTGTCC AACCACGAGC ACGAGCCGAC CAACTACACC
ATCGTAGTCG AACTCCAGGA GGTGACGTTG CTCGAAAATG GCTCGACCCG GGTCAATCGG
ACTGCACAGA ACGCGACGCG GGCGACCAAC ATGTCGATCC GCGTCGATCG GGCCGTCGAA
CTCGATCGCT TCCGCACCTC GCTGGCCCAC AACGAGACCT GGCTGCAGGA GCACACGGTT
GCGCCGCCCT TCGCCGGCGA CGATCTTCGA CTCACCTACC AGGTGTATCG CGGTGACCCA
CCGGCCGATC CCTCGACGGA GTCGGCCTAC CGGTGGCTCG CGCTCTGGGT TGACGTCGCA
AGCGACGGGG CAGGATGA
 
Protein sequence
MAHGSDWRLL LPENVRRLPF DLAFVFAFVG AVNLSVFLPF VQDTPLRVVF GLPFVLFIPG 
YAFIAALFPE RGQRAVDTED TADESHAAPS TAEGGIDGIE RVALSFGLSI AIVPLLGLVL
NFTPFGIRLV PIMVTVSIFT IVTGAIAAYR RQELPPEERF RVPYRQWIDS AGEELFEPNS
RTDAALNVLL VISILLATAS VAYAVAVPKQ GEAFTEAYLL TESDDGDLVA DNYPTNFTVG
EPQSLLVGVS NHEHEPTNYT IVVELQEVTL LENGSTRVNR TAQNATRATN MSIRVDRAVE
LDRFRTSLAH NETWLQEHTV APPFAGDDLR LTYQVYRGDP PADPSTESAY RWLALWVDVA
SDGAG