Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1060 |
Symbol | |
ID | 8383334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1032014 |
End bp | 1033111 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644972125 |
Product | Protein of unknown function DUF1616 |
Protein accession | YP_003129976 |
Protein GI | 257052143 |
COG category | [S] Function unknown |
COG ID | [COG4743] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACACG GGTCAGACTG GCGATTACTG TTACCCGAGA ACGTTCGGCG CTTGCCGTTC GATCTCGCGT TCGTGTTCGC GTTCGTCGGC GCCGTCAACC TCTCCGTGTT TCTTCCGTTC GTCCAGGACA CCCCTCTTCG TGTCGTGTTC GGCCTTCCGT TCGTGCTGTT CATTCCTGGG TACGCATTCA TCGCGGCACT GTTCCCGGAA CGTGGACAAC GGGCTGTCGA CACCGAGGAC ACGGCCGATG AATCACACGC CGCTCCGTCC ACGGCCGAGG GTGGAATCGA CGGCATCGAA CGTGTCGCCC TTTCGTTCGG GTTGAGTATC GCCATCGTTC CCCTGCTCGG ACTGGTCCTC AATTTCACGC CGTTCGGAAT CCGGCTCGTC CCGATCATGG TGACGGTGAG CATATTCACT ATCGTGACCG GGGCAATCGC AGCCTACCGA CGCCAGGAAC TGCCGCCGGA AGAACGCTTT CGAGTTCCAT ACCGCCAGTG GATCGACAGT GCGGGCGAAG AACTGTTCGA ACCGAACAGC CGGACGGACG CTGCGTTGAA TGTCTTGCTC GTCATTAGTA TTCTGCTCGC GACAGCGAGT GTGGCCTACG CCGTCGCCGT CCCGAAACAG GGCGAAGCGT TCACTGAAGC GTACCTGCTG ACGGAATCCG ACGATGGCGA CCTCGTTGCG GACAACTATC CGACGAACTT CACCGTCGGC GAACCCCAGT CACTGCTCGT CGGCGTGTCC AACCACGAGC ACGAGCCGAC CAACTACACC ATCGTAGTCG AACTCCAGGA GGTGACGTTG CTCGAAAATG GCTCGACCCG GGTCAATCGG ACTGCACAGA ACGCGACGCG GGCGACCAAC ATGTCGATCC GCGTCGATCG GGCCGTCGAA CTCGATCGCT TCCGCACCTC GCTGGCCCAC AACGAGACCT GGCTGCAGGA GCACACGGTT GCGCCGCCCT TCGCCGGCGA CGATCTTCGA CTCACCTACC AGGTGTATCG CGGTGACCCA CCGGCCGATC CCTCGACGGA GTCGGCCTAC CGGTGGCTCG CGCTCTGGGT TGACGTCGCA AGCGACGGGG CAGGATGA
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Protein sequence | MAHGSDWRLL LPENVRRLPF DLAFVFAFVG AVNLSVFLPF VQDTPLRVVF GLPFVLFIPG YAFIAALFPE RGQRAVDTED TADESHAAPS TAEGGIDGIE RVALSFGLSI AIVPLLGLVL NFTPFGIRLV PIMVTVSIFT IVTGAIAAYR RQELPPEERF RVPYRQWIDS AGEELFEPNS RTDAALNVLL VISILLATAS VAYAVAVPKQ GEAFTEAYLL TESDDGDLVA DNYPTNFTVG EPQSLLVGVS NHEHEPTNYT IVVELQEVTL LENGSTRVNR TAQNATRATN MSIRVDRAVE LDRFRTSLAH NETWLQEHTV APPFAGDDLR LTYQVYRGDP PADPSTESAY RWLALWVDVA SDGAG
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