Gene Huta_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0931 
Symbol 
ID8383204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp897120 
End bp898529 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content66% 
IMG OID644971995 
Productphosphoesterase RecJ domain protein 
Protein accessionYP_003129847 
Protein GI257052014 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCCG TGCCGAAACT CGCCGATCGA GCCGCGGAGT GTGCCCAGCG CCTTCGAAGC 
GCCGATGAGG TGCTCCTGGC CTCGCACATC GATGCTGACG GATTGACGAG CGCCGGAATC
GCCACGACGG CCCTTGAACG GGCGGGGATT CCAACGACAA CGGTCTTCAA GAACCAGCTC
GACGACGAAG AAATCGCGTC GATCGCCGCA CGAGACTTTC AGACGGTGCT GTTCACCGAC
TTCGGGAGTG GCCAACTCGA TGCGATCACG AAACACGAAC AGCAAGGGGA CTTCGAGCCG
ATCGTCGTCG ACCATCACCA GCCGGCCGAC GCCGAGACGC GCTATCACCT CAATCCCCTC
CTCGAAGGGA TCGACGGCGC ATCCGAACTT TCGGGGGCTG GGGCAAGTTA CCTACTCGCA
CGCGCGTTGG AGGAAGACGA ACAGGACAAC CGTGACCTCG CCGCGCTCGC GGTGGTCGGC
GCTGTCGGCG ACATGCAGGC AGTCGGCGGC GAGCTCGTCG GTGCGAATCG AGCGATCGTC
GAGGACGGAA TGGGAGCAGG CGTCCTCGAG GAGGCGACCG ACATCGCGCT GTATGGCAAA
CAGACCCGAC CGCTGCCGAA GCTGCTCGAA TACGCCGATC AACCCCAGAT TCCCGGGGTT
TCGGGCGACG AAGCCGGCGC GATCGACTTC CTGGAATCGC TCGGGATCGA TCTCGAAGTG
GATGACGAGT GGCGTCGATG GGTCGACCTC TCCGCGGAAG AGCGTCAGAC GGTCGTCAGC
GGGCTCGTAC AGCGTGGTGT CGAGCGGGGC GTGCCGGCGG ACCGGATCGA CTCACTCGTC
GGGACGAGTT ATACGCTCTC AGGAGAGGCA CAAGGCACCG AACTCCGTGA CGCAAGCGAA
TTTTCGACCC TGCTCAACGC GACGGCGCGC TATGAACGTG CCGACGTGGG CTTGGCCGTC
TGTCTCGGCG ACCGCGAGCA AGCCCTCGAA CGCGCCCGTC GATTGCTCGC GAACCACCGG
CGGAACCTTT CGGAGGGCCT TGAGTACGTC CGCGAGAACG GCGTCGAGTC GGGCGAGACA
GTCCAGTGGT TCGACGCCGA CGACGCTATC CGGGAGACGA TCGTGGGGAT CGTCGCCGGG
ATGGCACTCG GACTCCCCGG CGTCGACCGC GAACGGCCGA TCGTCGCCTT CGCCCGGAAG
TCCGAGGACG AGCGGAAGGT TTCGGCCCGG GGGACCGCCA CCCTCGTCCG CCAGGGGCTG
GACCTCTCGG ATGCGATCCA CACGGCGAGC GTCGCGGTCG GTGGCGGTGG CGGGGGCCAC
GACATCGCCG CCGGCGCAAC GATCCCGGCG GCCCGCCGAG AGGAGTTCAT CGACCGGCTC
GAGAGTGCTA TCGCCGAACA ACTGGCCTGA
 
Protein sequence
MAPVPKLADR AAECAQRLRS ADEVLLASHI DADGLTSAGI ATTALERAGI PTTTVFKNQL 
DDEEIASIAA RDFQTVLFTD FGSGQLDAIT KHEQQGDFEP IVVDHHQPAD AETRYHLNPL
LEGIDGASEL SGAGASYLLA RALEEDEQDN RDLAALAVVG AVGDMQAVGG ELVGANRAIV
EDGMGAGVLE EATDIALYGK QTRPLPKLLE YADQPQIPGV SGDEAGAIDF LESLGIDLEV
DDEWRRWVDL SAEERQTVVS GLVQRGVERG VPADRIDSLV GTSYTLSGEA QGTELRDASE
FSTLLNATAR YERADVGLAV CLGDREQALE RARRLLANHR RNLSEGLEYV RENGVESGET
VQWFDADDAI RETIVGIVAG MALGLPGVDR ERPIVAFARK SEDERKVSAR GTATLVRQGL
DLSDAIHTAS VAVGGGGGGH DIAAGATIPA ARREEFIDRL ESAIAEQLA