Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0154 |
Symbol | |
ID | 8382416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 149669 |
End bp | 150730 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644971212 |
Product | integrase domain protein SAM domain protein |
Protein accession | YP_003129075 |
Protein GI | 257051242 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.32279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCG GTACTGCCAT TCCAGAGGAG GTTGAAGATC CGATCGAGTA CTTCCTGACG GATATTACCT ACCAGGGAAA GAGCCAGCGG ACGAGTGACG CTTACGAACG GGTCCTCAGG GATTTCGAAG CATCACTCCG TGAGAACGGC GAGAAGCCCC TCGCTGTGGC CTCACATCGT GATTGTATGG CGTGGATCCA TTCCCAGCGA GAAGAGCTCT CAAAGAGCAC TGTGGCCACG TACGCGTCCT ATCTACACCG ATTTTACGCC TATATGACCC AGATCGGCGT CTTCGATTCG AATCCGATGG CGATCGTCGT CGAAGAGATG GACGAACGGA TCGACGCTGA TCCGGCTCGT CGCGACGTTT CGATCCCGGA AATGCAGGGC TTCGTCTCCG GAATCGACCA TCCGCTGGAC CGTGCGGTAA TCGTCACGTT GCTGAAGACC GGGATGCGAG TCGGCGAGTT GTGTAATCTC GATCAGCGTG ATCTCCATCT GTCCGATGAT CCCCGCGAAT CGGTAACGAC ACGACCCGCC CTCGATGGGC GACCGGACTC ACTGTTCGTC GCAAGTGAGC CCTCTCGGGG TGCAACAGTG AATGGCGAGC AGCGGGCTGC CTCGAACAAG CGCCGGCGAG ACACAGTCGT TCCTGTCGAT GCCGACCTGG CCGAGACGCT CCGGGCCTGG CTGGATGTTC GTCCTGACCC GGTTTCGTCC GCGCGTCCGC TGTTTACCAG TACGACGGAC AACTGGGGCC AGCGGATCAC GACTGATGGG GTACGTCACA TCGTCACCAG CCACGCAAGT GTGCATGGGT GGTACGACAA CGGTGGCGGT GTCGAGGAAA ACGTCACGCC ACACTACTTC CGGCACTTCT TCACCACACA CCTTCGAGAT CGAACCGGTG ACCGTGGGAT CGTGAAGTAT CTGCGCGGCG ACGTCGCCCA GGATATCATC GATACGTACA CCCACGATTG GGGAGATCGG GTTCGTGACG TATACGAAGA TCACATCTAC GAGCTTCCGG TGGCTGCATA TCGTACGATG TCAGAGACAT AA
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Protein sequence | MSTGTAIPEE VEDPIEYFLT DITYQGKSQR TSDAYERVLR DFEASLRENG EKPLAVASHR DCMAWIHSQR EELSKSTVAT YASYLHRFYA YMTQIGVFDS NPMAIVVEEM DERIDADPAR RDVSIPEMQG FVSGIDHPLD RAVIVTLLKT GMRVGELCNL DQRDLHLSDD PRESVTTRPA LDGRPDSLFV ASEPSRGATV NGEQRAASNK RRRDTVVPVD ADLAETLRAW LDVRPDPVSS ARPLFTSTTD NWGQRITTDG VRHIVTSHAS VHGWYDNGGG VEENVTPHYF RHFFTTHLRD RTGDRGIVKY LRGDVAQDII DTYTHDWGDR VRDVYEDHIY ELPVAAYRTM SET
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