| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4308 |
|---|
| Symbol | |
|---|
| ID | 8744936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 571140 |
|---|
| End bp | 573092 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646514851 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003405798 |
|---|
| Protein GI | 284167520 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.805936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACA GTACGAGGGA CTCCGTTACG CGCCGGGAAG TACTGGGTGG ACTCGCAGTC
GGTGCTGCTG TCATCTCGAC GCCCGTAGCT GCCAGCACGG ATACCGCGAG TGGAGCCGTT
GCCCAGCCTG ATGCGGGACC GCTCGCGGAT CAAGATGCCT TCGCATCATT CCTCGATGAA
TTCGTGAGTT CGCAACTGGA GGAACACGAT ATCCCCGGAG CGACAGTCGC CGTCGTCGAC
GGTGATTCGG AGGTCACGAG GGGATACGGC TTCAGTGACA TCGAGTCAGA GACGCCAGTT
CGGGCCGATG AAACGCTCTT TCGTATCGGC TCCCTGTCGA AACTGTTCAC GTGGACCGCC
GTGATGCAGG GCGTCGAACG CGGGCGATTT GATCTCGACA CCGACGTAAC CCAGTATCTC
GACGAGATCG ACGTTCCCGC GACGTACGAG CAGCCGATCA CGCTCGAGCA TCTCGGGACG
CATACGGCCG GGTTCGAGGA TCGCGTTCAC GGGACGTTCG TGGTGGACGA AACCGACCTC
CAGCCGCTCG AGCAGTCCCT AGCCGAAGAG CGGCCCGCTC GCGTTCGACC GCCGGGGCAG
TTCACCGCTT ACTCGAACTA CGGCGCGGCG CTGGCGGGCC ACATCGCTGC AACGACTGCC
GGGACGTCGT TTCGGAACTA CGTCGACGAG GAGATATTCG AGCCGCTCTC GATGGATCGG
AGCACGTTTG CCCAGCCGGT CCCGGACGTG CTTCGCGCTG ATCTCGCAAC GGGGTACACG
GCTGCAGACG GCGGGTTCGA GGACCGTCCC TTCGAGTTCG TCGGAATGGC GCCGACGGGA
GCGATGAGCG CGACCGCGAC CGACATGGCA CGGTTCGTCC GGGCACACCT TCAGGGTGGA
ACCGTCGATA CCGAGCGGAT CCTCGAGTCG GAAACGGTTG CAGAGATGCA CCGTCGGCGG
TTCGCCAACG ACGAACGGGT GAACGGGATG GCCTTCGGCT TCTACGAGAT GAGTCGCTAC
GGGGTACGCG TGATCGGCCA CGCCGGTGAT ACGCCGTCGT TTCACAGCCT CCTTTTTCTC
CTTCCCGAAC ACGACGTAGG GGTATTCGTT TCGTACAACA GCCCAGGCGG AATCGACGCC
AGAGAGGAAT TCATCGACGA GTTCGTCGAT CGATACTTCC CCACGGAAGA GCCGCCGGGA
GCGGTCCCAG ATAGCACGCC GACGCGCGGA TCCGATCTGG AGGGCACGTA CAGAGCGCTC
AGGATGCCCC ACACGACCTC GGAGAAGTTC ATCGGTTTCA GCGAAACCGT CTCGGTTTCG
ATCGACGATC GGGGGCGACT GGTCACAACG CACGCGGGTG AAACGAAACG ATGGGTCGAA
GCGGATCCGC TCTTCTTCCG GGAAATCGAC GGCCCCGACC ACCTCGCATT TCGTGAGACG
GACGGGGACG TTACACACCT CTTTCTGGGG AGTCGCCCGC CATCGGCGTA CGAGCGGCTC
TCGATCGCGG AGCAACCGCG GATTCACGGT GCGATCGTCG CCCTCTCGGT GCTCGTGTTC
GTGACTGCTG TCGTCGGATG GTCGGTTGCG GCCGTCTGGC GCCGGTATCG CGGTGTGAGC
CGACCGAAAG CGGATTCTCC GCTCCGATAT GCACGCTGGG CGGGTGGTAT AGCGGCCGCC
TGTTTCCTCC TGTTCACCGT CGGTTTCGCG GGAGCGCTAG TGATGCGACC GACCGCGTTT
CTGTACGGCG ATCGGTTCCT GTTTCGGATC CTCACGATCC CCTCTCTCGT CGGGGCGGTC
GCGAGCTGTG TGACGGCCGT CTTCGCCGGT GTCGCCGTTC GGAACCGAGC GTGGGGGCGC
TGGAAGCGGA TCTACTACGC CTTCGTCGCC CTCGCCGCGA TCGCGTTCAC GGTATTGCTC
TGGTACTGGA ATCTCCTCTG GTACCAGATG TGA
|
|---|
| Protein sequence | MSYSTRDSVT RREVLGGLAV GAAVISTPVA ASTDTASGAV AQPDAGPLAD QDAFASFLDE
FVSSQLEEHD IPGATVAVVD GDSEVTRGYG FSDIESETPV RADETLFRIG SLSKLFTWTA
VMQGVERGRF DLDTDVTQYL DEIDVPATYE QPITLEHLGT HTAGFEDRVH GTFVVDETDL
QPLEQSLAEE RPARVRPPGQ FTAYSNYGAA LAGHIAATTA GTSFRNYVDE EIFEPLSMDR
STFAQPVPDV LRADLATGYT AADGGFEDRP FEFVGMAPTG AMSATATDMA RFVRAHLQGG
TVDTERILES ETVAEMHRRR FANDERVNGM AFGFYEMSRY GVRVIGHAGD TPSFHSLLFL
LPEHDVGVFV SYNSPGGIDA REEFIDEFVD RYFPTEEPPG AVPDSTPTRG SDLEGTYRAL
RMPHTTSEKF IGFSETVSVS IDDRGRLVTT HAGETKRWVE ADPLFFREID GPDHLAFRET
DGDVTHLFLG SRPPSAYERL SIAEQPRIHG AIVALSVLVF VTAVVGWSVA AVWRRYRGVS
RPKADSPLRY ARWAGGIAAA CFLLFTVGFA GALVMRPTAF LYGDRFLFRI LTIPSLVGAV
ASCVTAVFAG VAVRNRAWGR WKRIYYAFVA LAAIAFTVLL WYWNLLWYQM
|
|---|
| |