Gene Htur_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3578 
Symbol 
ID8744198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp3680126 
End bp3681238 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content72% 
IMG OID646514159 
Productprotein of unknown function DUF58 
Protein accessionYP_003405113 
Protein GI284166834 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTGA CGCTCCGCGG CTGGACGGCG CTGTTCGTCG TGGTCGTCTC GCTGGCGATG 
GGATGGGAGT TCGGCCCGCG GGCGCTCAAC GCCGTCGTGG TGCCGTTGGC GGTAGTTCTG 
CTTGCTGGAG TGGTTGCGGT CGGCCGGGCC GACCGCCCCG AGATCAGACG CGCGCCCGTC 
CCCGAGGGGT TCCCCGGCGA TCGACGGACG ATCGAACTCG CGATCGAGTC GTCGGCGACG 
GTCTCGGCGA CCGTCCGCGA CGACGTCGGC GACGGCATCG CGGTACTCGA GAGCGACGAC 
GAGACGGCCG CGATCGAGGA CGGCGCGCCC GTCGTCGAGA CGACCCTCGC GGGCGACGAC 
CGCGTCGGGT ACGAGATCCG ACTCGAGGAG CGGGGCGAAC ACCGACTGGG GCCGGCGACG 
ATCACCGTCA GCGACCTCTT CGGACTCGTC CGGCGCCGCT TTGCCGACGA GGGGACGACG 
ACCGCCCTCG TCTACCCGCG CGTCTACGAG GTTCGATCCG GCCCCGGGAG CGAGGTTCGA 
GCGGTCACCG ACGCGCTCGC GGGACAGGAT CGCGACGCGT TCGACCACCT CAGGGAGTAC 
CAGCGCGGCG ACTCGCTGCG GGACGTCCAC TGGAAGTCGG CCGCCAAGCG GCCCGACGCC 
GACCTCGTCG TCACGGAGTA CGCGGACACC GAGGAGACCG GGACGGCGAC GATCGCCGCC 
GAGTGCGTGT CCGGCCGAGA CGACGAGCTG GCGACGGCGG TCGCGAGCGT CGCGAGACAC 
CTCCTCGAGG CCGACGTCGA CGTCGGCCTC GCGCTCCCGA ACGCCGACTG CGAGCCGGGT 
TCGGGCCACG ACCACGCTCG CCGGCTGCTG GCGGCGGCGG CCCGCCTCGA GGCCGGCGAA 
CTCGAGGCGG GGCGGCGAGA GGAAGCGGAC GTCGTGATCC GGAGCGACGC CGACGGGACG 
CGGGTCGTGA TCGACGATCG ATCGATCCCG TTCGAACGAC TCGTCGGGGA TCGCGACCGA 
GAACGGACCT CACACGATAG GCTCGGAGCA CCCGATCTAC GAGGTCGAGA TCGGCCCGAC 
GGCGGCCCTG ACGAATCGGG GGTACCGACA TGA
 
Protein sequence
MRLTLRGWTA LFVVVVSLAM GWEFGPRALN AVVVPLAVVL LAGVVAVGRA DRPEIRRAPV 
PEGFPGDRRT IELAIESSAT VSATVRDDVG DGIAVLESDD ETAAIEDGAP VVETTLAGDD 
RVGYEIRLEE RGEHRLGPAT ITVSDLFGLV RRRFADEGTT TALVYPRVYE VRSGPGSEVR 
AVTDALAGQD RDAFDHLREY QRGDSLRDVH WKSAAKRPDA DLVVTEYADT EETGTATIAA 
ECVSGRDDEL ATAVASVARH LLEADVDVGL ALPNADCEPG SGHDHARRLL AAAARLEAGE 
LEAGRREEAD VVIRSDADGT RVVIDDRSIP FERLVGDRDR ERTSHDRLGA PDLRGRDRPD 
GGPDESGVPT