Gene Htur_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1562 
Symbol 
ID8742153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp1622002 
End bp1623108 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content69% 
IMG OID646512138 
Productinner-membrane translocator 
Protein accessionYP_003403121 
Protein GI284164842 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCG GCTCGAGCGA CGGACTGCTG GCCGGGCTCC GCCGGCCGTT CGAGGGGCCG 
AACACGATGG GGAACACGCC GGGCTTCTGG CTCGGATTCG TCGCCGCCGT AGCCGTCCTC
GCGGCGCTGC CGGCCCTCTT CGGCTACTAC GCCGCCGAGA TCGGCGCCGT GTTCCTCGCG
TACGCCCTGC TGGGCGTCAG CCTCGCCTTT ATCTGGGGCT ACTGCGGAAT CTTGAGCTTC
GGCCAGGTGG CGTTCTTCGG CATCGGCGGC TACGCGTTCG GCGTCGTCGC GATCAACGTG
CCGACGCTGA CCGGGGCGAC GCTGGGGCTG CTGGCCGCGG TCGCCGTCTC GACGCTCGTG
GCCGCCGCGC TGGGCTACTT CATGTTCTAC GGCGGCGTCC GGGACGTCTA CGTGACGATC
TTAACGCTCG TCGTCGCGCT GGTCCTCTAT ACGTTTATGG GCCAGACCGC CGGCGGCGAG
TGGGCGATCG GCGACGCCCG TCTCGGCGGG TTCAACGGGA TGAGCGGCGT CCCCGACCTC
GGGATCGGAA TCGGTTCGAT CGGCCTCGAG ATCGGCATCG TCGGCCACTA CTACGTGACG
CTGGGCGCGC TCGCGGCGAC CTACCTCGGC CTGCGCGCGC TGGTCAACAG TCGGTTCGGG
TACGCGATGG TCGCGACCCG CGAGGACGAG AGCCGGACCG AGATGTTCGG CTACAACACG
ACGTTCATCA AGTTCGCCGT GTTCACGATC GGCGGTGCGA TCGCCGGCCT CAGCGGCGTC
CTGTTCACCA CGCAGAACAA CTACATCGAT CCGAGCGTGT TCGGCATCAC CGCCGCCGCC
CTGCCGGTCG TCTGGGCCAG CGTCGGCGGC CGGACCTCGC TTCTGGGCAC CGTCGGCGCC
GCGCTCGCGA TCCAGTTCGT CGACTATCAG CTCGCGCTCT CGGGCAGCGA GTGGGCGCTG
GTGATCATCG GCTCGCTGCT GGTGTTCGTC GTCCTCGTGA TGCCCGAGGG GGTCGCGCCG
CGGCTCCGCG ATCTCGTCGT CGACTACCGC TCGTCCGAGC CGACGCCGGC AGACGCGCCG
GCCGGCACTG AGGAGGTGAG CGACTGA
 
Protein sequence
MSIGSSDGLL AGLRRPFEGP NTMGNTPGFW LGFVAAVAVL AALPALFGYY AAEIGAVFLA 
YALLGVSLAF IWGYCGILSF GQVAFFGIGG YAFGVVAINV PTLTGATLGL LAAVAVSTLV
AAALGYFMFY GGVRDVYVTI LTLVVALVLY TFMGQTAGGE WAIGDARLGG FNGMSGVPDL
GIGIGSIGLE IGIVGHYYVT LGALAATYLG LRALVNSRFG YAMVATREDE SRTEMFGYNT
TFIKFAVFTI GGAIAGLSGV LFTTQNNYID PSVFGITAAA LPVVWASVGG RTSLLGTVGA
ALAIQFVDYQ LALSGSEWAL VIIGSLLVFV VLVMPEGVAP RLRDLVVDYR SSEPTPADAP
AGTEEVSD