Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_20590 |
Symbol | |
ID | 7314383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2225388 |
End bp | 2228066 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643612503 |
Product | glycoside hydrolase family 2 sugar binding |
Protein accession | YP_002509799 |
Protein GI | 220932891 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATGTA TTATTAAAGA ATTAAATGGA CTATGGAACT TTACGACAGA CCCAGAAAAA ATTGGAGAAC AGAATGAATG GTATATTAAC GGTTTTGAAG GTGAGTCCGT TAAGGTCCCC GGGGCCTGGC AAACTTACAA TAAAGAGATG GTTACTTATA CAGGCTATGC CTGGTACTCA AGGGAGTTTA ATATAAATGA AGCCATCCAC GAATTTAAGA GATTTTTCTT AAAGTTTGAA GCGGTAGATT ATGTGTCTGA TGTATGGATA AATGGTAAAT ACCTGGGTTC CCACGAGGGA GGGTATACCC CTTTCGATTT TGAAGTTACC GAGCACCTTA AAGAAGGGGA TAATTTAATT GTGGTCAGGG TTTTTGATCC TGATGATAAT GATGAGATTC CCCATGGCAA ACAGGGAAGC TGGTATACAA GGGTAAGTGG TATCTGGCAG GATGTATTAT TAGTTGGATA TGACAAAACC TTTATTGAAA ATGTTCTTAT CACCCCTGAT ATTGATAATA AACGGGCTAT AACCCAAGTT AAAATAAAAG ATAGAGATAG GCTAGTCAAC CCCAGAATAG AATTTAAAAT AGACCCCAGG GTAAATGGTA ATAAAGTAGA GGGAAGTAAA ACACATACTT ATAAGTATTT CCTGGATGAA CAGGAGTTAT ATGAACTGGA AATTTTAGAT TTATATTTAT GGGGTCCAGA ATCACCGGCC TTATACGACA TGACAGTTAT ATTAAAGGAT GGCAATAGTA TAATTGACAG TTATCAAACT TACTTTGGAA TGAGGAAAAT AGAATATAAA AATGGGATGG TATATTTAAA TCATAAACCA TTATATATAA GAGGGGCCCT GGACCAGGCC TTCTGGCCTA AAACCATCTA CCGACCGGAA AGTGAAGAGT TGATAAAAGA GGAGATATTA AAGGCTAAAG AGATGGGTTT TAACCTTTTA AGAAAACATA TAAAGACAGA AGACCCCAGA TATCTTTACT GGGCCGATTA TCTTGGAATG TTAATTTGGG AAGAACCGGC TAACTATGCC AGCTGGACCC CGCAGGCAAG GAAGAGGTTT AAAAAGGAAT TTACCAGAAT GGTTAAAAGA GACTATAACC ATCCTTCAAT TATTGCCTGG AGTATATACA ATGAAGAGTG GGGACTGGAA TGGAAACTAA AAGAAAATAA GGATATGCAA AAGTGGGTTG AAGGTTTTTA TGAATATGCC AGGGAGCTGG ATCCTACCCG GTTAATCTGT GACAATTCAG GATGGGCCCA TGTCAAAACA GATATAAATG ATTACCACCG ATATTTTGCT GTACCGGAAA ATCATAAAGA ATGGCAGGAA GATCTGGATA ATTATATTAT AAAAAAACCT GGAGCAAATT ATGTTGACGG GTATAAATAT AACGGAGAAC CTTTAATTGT TTCCGAGTTT GGTATGTGGG GCTTACCGGA AATAAGTAAA ATCGAAGAGG CATATGAGGA GTTGCCTGAA TGGTACCGGG GTAATTCAAA ATTATTTTCG GAGGACTTTA AAATACCTGC TACCCTGAAA GAAAATTATA AAAAATATAA TCTTAATAAA ATATTCAAAA GTTATGATGA GCTATGTTAT TTAACCCAGG AGAGGCAATT TAGAGGGGTA AAGAGTATTA TAGAGGAGAT GAGAAAAAGA AGTGAGATTG CAGGATATGT AGTAACAGAA CTGACAGATA TTGAATGGGA AACTAACGGA TTTCTGGATT ACTTTAGAAA TCCTAAATTT AGAAATAATT GTATTAACCA TTTTAATGGC CAGGTGATTC TTGCTATTAA TATAAATAAA CATAACTTCT GGTCAGGTGA AGAATGCTCC TTTACTCCCA TAGTTATAAA CAATAGTGAT AAAAAGATTC AGGGAGTTTT TAGATGGTAT TTGGAAGAAA GCGAATTGAA GGGGATCTTT CCTGTTAAGA TACCGGCTTA TTCAAACCAG CGTCTTGATG AAATTAAATT TAACTTCCCT GGTGACTGGA CAGGATCCAG AGGGGTTAAA TTGAGGGTTG AGCTGGAAGA GGAAAAAGAG GTAGTTACTT CAAATTATGA AGAATTAACG GTAACCAATC GAAGAGAAAT AAAGAAAACA GGGAAGTCAT TACAGGTAAA GGGTTTATCT CATGAATTTA AAAATAAACT TAAGAACAAT GGATTTGAAT TGAAAACTAA TAATTCCCTT GTACTTACTG ATAATTTGAC TGAAGAAGTA CTAAAAGAAG TGCGTAATGG GACCCGGGTA GTTTTTCTGG CTGAAAATGG CAACAGGATT CAGGATAAGG GTTATATTAA TTTTACCAAA TTGCCTGGTG GCGAGAGCTG GGATAGGGCT GCTACCTTTA ATTTCATAAA TACAGATATT TTTGATGGTA TTCCCCTTTT AAAAATTTCG GGTTGGGAAC TTGAAGATAT CTATCCAGAT TACAAGGTCA AAAACCTGGT TGATTTAAAT TGTACAGAAA TAATAAGTGG TAATTTTGCC GGATGGTTAG GTGACTTTGG GGCAACTACC TTTGTTATGA ACTGGGGCAG GGGTCAGGTA TTAGTTACAA CATTAAAATT AATTTCTAAT TATCATACTC ACCCTATTGC CAGTCTTTTA TTAAATAAAC TTATAAATTA TTTTCAAGAA CACAAATAA
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Protein sequence | MGCIIKELNG LWNFTTDPEK IGEQNEWYIN GFEGESVKVP GAWQTYNKEM VTYTGYAWYS REFNINEAIH EFKRFFLKFE AVDYVSDVWI NGKYLGSHEG GYTPFDFEVT EHLKEGDNLI VVRVFDPDDN DEIPHGKQGS WYTRVSGIWQ DVLLVGYDKT FIENVLITPD IDNKRAITQV KIKDRDRLVN PRIEFKIDPR VNGNKVEGSK THTYKYFLDE QELYELEILD LYLWGPESPA LYDMTVILKD GNSIIDSYQT YFGMRKIEYK NGMVYLNHKP LYIRGALDQA FWPKTIYRPE SEELIKEEIL KAKEMGFNLL RKHIKTEDPR YLYWADYLGM LIWEEPANYA SWTPQARKRF KKEFTRMVKR DYNHPSIIAW SIYNEEWGLE WKLKENKDMQ KWVEGFYEYA RELDPTRLIC DNSGWAHVKT DINDYHRYFA VPENHKEWQE DLDNYIIKKP GANYVDGYKY NGEPLIVSEF GMWGLPEISK IEEAYEELPE WYRGNSKLFS EDFKIPATLK ENYKKYNLNK IFKSYDELCY LTQERQFRGV KSIIEEMRKR SEIAGYVVTE LTDIEWETNG FLDYFRNPKF RNNCINHFNG QVILAININK HNFWSGEECS FTPIVINNSD KKIQGVFRWY LEESELKGIF PVKIPAYSNQ RLDEIKFNFP GDWTGSRGVK LRVELEEEKE VVTSNYEELT VTNRREIKKT GKSLQVKGLS HEFKNKLKNN GFELKTNNSL VLTDNLTEEV LKEVRNGTRV VFLAENGNRI QDKGYINFTK LPGGESWDRA ATFNFINTDI FDGIPLLKIS GWELEDIYPD YKVKNLVDLN CTEIISGNFA GWLGDFGATT FVMNWGRGQV LVTTLKLISN YHTHPIASLL LNKLINYFQE HK
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