| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_06600 |
|---|
| Symbol | |
|---|
| ID | 7314566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 716044 |
|---|
| End bp | 717159 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643611091 |
|---|
| Product | Thiamin pyrophosphokinase catalytic region |
|---|
| Protein accession | YP_002508412 |
|---|
| Protein GI | 220931504 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4825] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000000223419 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG GTAAAGTTGT AATAGATAAA AGAACAAAGG ACCTTGTTAA AAGAATAAAA
CCTGATGAAA TTGCTGTTAT TAACCACAGG GATCTTGATA GGGTAGCTGG ACAATCACTT
GTTGAAAGCA AGGTTAAAGC GATAATTAAT ACAACCAGGA CTATCAGTGG GAGATACCCA
AATCGTGGAC CTAAAATATT AACTGAGGCG GGTATACCGA TTATAGATAA CTGTCAGGGA
GACCTTTTTG ATAAATTGAA AGATGGAGAT GAAATTATTA TTGAAAAGGG TTTAATATAT
AAAAATAACC GGCTTATTGG ACAGGGTTTT CCCCTTAAAT CTAAAGATAT AGAAGACAAA
ATGAGGGAAG CCCAGACAAA TATAAAGTAC GAATTGAATA AATTTATAGA AAATACACTA
AATTATGCTC GCCAGGAAAA GGATTTAATA TTAAATTTAT CGGTTCCAGA AATAGAAACA
ACTTTCGATA ACCGACATGC TCTGGTTGTT GTCAGAGGGG CTGACTATAA AGAAGACCTG
CAAGCTGTTG AGGCCTATAT CAGGGAGATG AAACCGGTTA TAATTGCAGT AGATGGAGGC
GCTGATGCCT GTCTGGAAAG GGGATTTAAA CCTGATATAA TTATTGGTGA TATGGATAGT
GTCAGTGACC GGGCTTTAAA TAGTGGTAGT GAGTTAATAG TTCATGCCTA TCCCGATGGA
AGGGCTCCTG GCCTGGATCG GATTAATAAA ATGGGATTAG ATGCAACCCT CTTTCCGGCA
CCAGGGACGA GTGAAGATAT AGCTTTACTT CTGGCTTATG AAAAAAAAGC TGATTTAATA
GCTGCTGTGG GGACCCATTC CAATTTAATT GATTTTCTGG AAAAGGGGAG GCCCGGTATG
TCCAGCACTC TTCTTGTAAG GTTAAAGATA GGTGATAAGC TGGTTGATGC CCGTGGAGTA
AGTCGCTTAT ACCATAGCCG GTTATATTAT CATTACTGGC TGCAGGTGGG GCTGGCAATA
TTGATCCCTT TAATTTCTGT TACTTTTCTG TCACCAATAT TAAGTCAACT GATACAATTG
ATGGCTTTAA AGTTAAGGTT AATTTTTAGT TTTTGA
|
|---|
| Protein sequence | MIKGKVVIDK RTKDLVKRIK PDEIAVINHR DLDRVAGQSL VESKVKAIIN TTRTISGRYP
NRGPKILTEA GIPIIDNCQG DLFDKLKDGD EIIIEKGLIY KNNRLIGQGF PLKSKDIEDK
MREAQTNIKY ELNKFIENTL NYARQEKDLI LNLSVPEIET TFDNRHALVV VRGADYKEDL
QAVEAYIREM KPVIIAVDGG ADACLERGFK PDIIIGDMDS VSDRALNSGS ELIVHAYPDG
RAPGLDRINK MGLDATLFPA PGTSEDIALL LAYEKKADLI AAVGTHSNLI DFLEKGRPGM
SSTLLVRLKI GDKLVDARGV SRLYHSRLYY HYWLQVGLAI LIPLISVTFL SPILSQLIQL
MALKLRLIFS F
|
|---|
| |