| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_02410 |
|---|
| Symbol | |
|---|
| ID | 7312561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 248392 |
|---|
| End bp | 249486 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643610664 |
|---|
| Product | alpha amylase |
|---|
| Protein accession | YP_002507997 |
|---|
| Protein GI | 220931089 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCAT TTTACTGGGA TTGTGAATCT AACTGGTACA GGAAAGTTAA AGAAAAGTTA
CCTGAATTAT ATTATGCTGG AATAACTGAT ATCTGGTTGC CGCCCCCATC CCGGGGTTTA
AACCAGGGGG GGATGGGCTA TGATATTTAC GATCATTACA ATTTGAACAC CAGGTTTGGT
ACAAAAAGGG AGTTAAAAGA TTTAATCAGG ACAGCCCACC GCTATGGAAT AAGGGTAATA
GCAGATGTAG TTATGGGACA TGCCATCGGA GGTAAAAAAG AATATAACCC ATACCTTGAG
ACCGAAACCT ATACAAAATT TAATCAGCCA GAATTTCCTA AAAATTATAA ACATTTTTGC
CATAATTGTG TTGGTTGCCA TACAGATAAT AGTTACGGGG AAAAGATATG CTATTATTCT
GATAATGGTT ATATGAAGGA CAACCTTATC AAATGGTGCC GCTGGTTAAA GGACAGTATA
GGATTTGACG GATTCAGACT GGATAATTGT AAGCAGATAA GGTGGGACTT TATCAGGGAC
TGGAAAGAAG CTTTGCAGAC CTTCACGATT GGTGAGTATT GGGATGGAGA TAGAGGATTA
TTACAACGAT GGCGGGATTA TACCAACTGT AATGTCTTTA ATTTTCCACT TTTCTATTCC
CTGAAGGAGA TGTGTAATAA TCCAGCCTTA TTTGATATGA GATGTTTAAT GGATAATGTT
TTCGAAGGTT CAGTTAGTTT TGTTGAAAAT CATGATACTG ACCGGTTTGA CCCCGTTATT
TTTAATAAGA TACTGGCCTA TGCCTTTAAT ATTTTGTTTA CCGATTATAC CTGTATTTTC
TGGAAGGACT ATTATATATA TAATTTAAAA AGAGAGATAG ATAGTCTCTT AGAAATCCGT
AATCGAACAG TTGACCGGGT AGAGATAGAA TATGCTGATT ATGATCTTTT AGTTGCCCGG
CGGGGGAATT ACCGGATCTT TATAAATAAA GGGGAAACTA CCCGGATTTA TAATGGAATG
AGAATAGATG GAGCCAATTA TAAAATAGCC TACAATACCC GGGCTGAACA TTATCTTGAA
GAAAGTATGA CTTAA
|
|---|
| Protein sequence | MQAFYWDCES NWYRKVKEKL PELYYAGITD IWLPPPSRGL NQGGMGYDIY DHYNLNTRFG
TKRELKDLIR TAHRYGIRVI ADVVMGHAIG GKKEYNPYLE TETYTKFNQP EFPKNYKHFC
HNCVGCHTDN SYGEKICYYS DNGYMKDNLI KWCRWLKDSI GFDGFRLDNC KQIRWDFIRD
WKEALQTFTI GEYWDGDRGL LQRWRDYTNC NVFNFPLFYS LKEMCNNPAL FDMRCLMDNV
FEGSVSFVEN HDTDRFDPVI FNKILAYAFN ILFTDYTCIF WKDYYIYNLK REIDSLLEIR
NRTVDRVEIE YADYDLLVAR RGNYRIFINK GETTRIYNGM RIDGANYKIA YNTRAEHYLE
ESMT
|
|---|
| |