Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6423 |
Symbol | |
ID | 8548838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 8808509 |
End bp | 8809414 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646391084 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_003270785 |
Protein GI | 262199576 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCGC GCGTGAGAGT CGTTTCGTGG AACGTAAACG GTCTGCGCGC CGTCGATCGC ACCACGCCGC GCCGGGCCTC GGCCGCCGCG TCCCCGTCCC CAGGGCAGGT GCGTGCGAGC ACGGGCGCAC GGGCGCAGCG CGGCGGCGGG CGCTTCCGCC GCTGGATCGA GCGCGTGGAC GCCACCATCG TCGGCGTGCA GGAAGTGCGC GCGCGTCGCG ATGCGCTGCC GCGGCGTCTG CTGCAGCCGC GCGGTTGGCA CGCGCACCTG GTCGAGGCCG AGCGCGCCGG CTACAGCGGC GTGGGCCTGT ACGCCAAGCT GGCGCCCGAC GGCGCCGACA CCGCGCTCGC GGGCGGGGAT TTCGACCGTG AGGGCCGATT ACAGATCGCG CACTTCGGCC GCCTGAGCGT GGCCAACGTG TACTTCCCCA ACGGCAACGG CAGCAACCGC GACAACAGCC GGGTGCCCTT CAAGCTCGAC TTCTACCGCG CGCTCTTCGA CGCGCTTGGC GCGCTGCGTG ATGCCGGACA GCGTGTCCTG GTGATGGGCG ATTTCAACAC CGCGCACCGC GACATCGATC TCGCGCGTCC CAAGCAGAAC CGCAAGACCA GCGGATTTCT GCCCGAGGAG CGCGCCGAGC TCGACCGCTG GGTCGCGGCC GGCTGGGTCG ATACCTTTCG CCACTTCGAG CCCGGACCCG GTCACTACAC CTGGTGGAGC CAGCGCGCCG GCGTGCGTGC GCGCAACATC GGCTGGCGCA TCGACTACGT ATTCGCGTGC CCCGAGGCCA TGCCCTTCGT GCGCAGCGCG TTCCTCATGC CCCAGGTCGG CGGCTCGGAT CACTGCCCGC ACGGGGTCGT CCTCGATCCC GCGATCACGC GCGCCGCGCC GCCGTTGCCC TCCTGA
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Protein sequence | MLARVRVVSW NVNGLRAVDR TTPRRASAAA SPSPGQVRAS TGARAQRGGG RFRRWIERVD ATIVGVQEVR ARRDALPRRL LQPRGWHAHL VEAERAGYSG VGLYAKLAPD GADTALAGGD FDREGRLQIA HFGRLSVANV YFPNGNGSNR DNSRVPFKLD FYRALFDALG ALRDAGQRVL VMGDFNTAHR DIDLARPKQN RKTSGFLPEE RAELDRWVAA GWVDTFRHFE PGPGHYTWWS QRAGVRARNI GWRIDYVFAC PEAMPFVRSA FLMPQVGGSD HCPHGVVLDP AITRAAPPLP S
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