Gene Hoch_6423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6423 
Symbol 
ID8548838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8808509 
End bp8809414 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID646391084 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003270785 
Protein GI262199576 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGC GCGTGAGAGT CGTTTCGTGG AACGTAAACG GTCTGCGCGC CGTCGATCGC 
ACCACGCCGC GCCGGGCCTC GGCCGCCGCG TCCCCGTCCC CAGGGCAGGT GCGTGCGAGC
ACGGGCGCAC GGGCGCAGCG CGGCGGCGGG CGCTTCCGCC GCTGGATCGA GCGCGTGGAC
GCCACCATCG TCGGCGTGCA GGAAGTGCGC GCGCGTCGCG ATGCGCTGCC GCGGCGTCTG
CTGCAGCCGC GCGGTTGGCA CGCGCACCTG GTCGAGGCCG AGCGCGCCGG CTACAGCGGC
GTGGGCCTGT ACGCCAAGCT GGCGCCCGAC GGCGCCGACA CCGCGCTCGC GGGCGGGGAT
TTCGACCGTG AGGGCCGATT ACAGATCGCG CACTTCGGCC GCCTGAGCGT GGCCAACGTG
TACTTCCCCA ACGGCAACGG CAGCAACCGC GACAACAGCC GGGTGCCCTT CAAGCTCGAC
TTCTACCGCG CGCTCTTCGA CGCGCTTGGC GCGCTGCGTG ATGCCGGACA GCGTGTCCTG
GTGATGGGCG ATTTCAACAC CGCGCACCGC GACATCGATC TCGCGCGTCC CAAGCAGAAC
CGCAAGACCA GCGGATTTCT GCCCGAGGAG CGCGCCGAGC TCGACCGCTG GGTCGCGGCC
GGCTGGGTCG ATACCTTTCG CCACTTCGAG CCCGGACCCG GTCACTACAC CTGGTGGAGC
CAGCGCGCCG GCGTGCGTGC GCGCAACATC GGCTGGCGCA TCGACTACGT ATTCGCGTGC
CCCGAGGCCA TGCCCTTCGT GCGCAGCGCG TTCCTCATGC CCCAGGTCGG CGGCTCGGAT
CACTGCCCGC ACGGGGTCGT CCTCGATCCC GCGATCACGC GCGCCGCGCC GCCGTTGCCC
TCCTGA
 
Protein sequence
MLARVRVVSW NVNGLRAVDR TTPRRASAAA SPSPGQVRAS TGARAQRGGG RFRRWIERVD 
ATIVGVQEVR ARRDALPRRL LQPRGWHAHL VEAERAGYSG VGLYAKLAPD GADTALAGGD
FDREGRLQIA HFGRLSVANV YFPNGNGSNR DNSRVPFKLD FYRALFDALG ALRDAGQRVL
VMGDFNTAHR DIDLARPKQN RKTSGFLPEE RAELDRWVAA GWVDTFRHFE PGPGHYTWWS
QRAGVRARNI GWRIDYVFAC PEAMPFVRSA FLMPQVGGSD HCPHGVVLDP AITRAAPPLP
S