Gene Hoch_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5352 
Symbol 
ID8547764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7366718 
End bp7367734 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID646390025 
Producthypothetical protein 
Protein accessionYP_003269729 
Protein GI262198520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00760583 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGG GAAGCTCAGG CAGCAGCGCC GGCCAGGCAG CTCCATCCCC AGCACCGGCA 
CCGCCCGCGC AATCGGGCAG CGCCCCGAGC CAGCCGATCG AGCGCCTGGT CATCGAGGGC
CAGCTCGGCC TGCGGGTGGA CGATATCGAT CAGACCATGG CCACGCTGCG CGCCAAGGTC
GGCGAGTTGC GCGGCAGCCT GGTGCGCGAA CAGCTCGGCG GCGGCGCGTC CTCGCGCAAC
GCCAACATCC GCATCCGGGT GCCGCCGGCC GCGGTCGAGG ACTTCGTCGC CTGGCTCGGC
CAGCAGGGCG AAGTCACGCA CCAGTTCATC GAGCGCACCG ACGTCTCTCG GCAGTTCATC
GACCAGGCTA TCGCCCTGGA AAACCTTCAG CTCACCCTCG ATCGAACCCG CGCGCTGCTG
CAGCGCGAGG ATCTCGACAT TCAGCAGGTG CTGGTCATCG AGGGCGAGCT CACCCGGCTC
CGCGGGCGCA TCGAACAGAT CAAGGGCGAG CAGCGCTGGC TCGAGAATCG CGTCGCGCAG
GCCACGCTCA ACGTCAACCT GCGCAGCGAG ACCGAGGTGT TCCTGCGCCC CAGCGCCAAG
TTCTATCCCG GCCCGCGGCT CACGGGCCTG TATTTTCTCG ACCGCGAGGA CGGACCCAAG
GGCCGCCTCG GCGGCGGCGC GGCGCTGTAC TTCACGCCCC AGACCAGCGT TGAACTCGAC
GTCTTCGCCG GTCGCGACGG CGGCTCGAGC GGACTGCTCA CCACCATTGG CGGCTCGGTG
TACTCCGACT TCCTCGGCCG CGGTCGGCGC CGCTTTTTCA ACCCCCACCT GGGCATGCGG
CTCGGGTTCG CGCACTTCGA TGCGCCGAGT TTTGCGTTTG GCGCCGACGC CGGCGTCGAG
CTGTTCAAAC ACGAGTATCT GATGATCGAC ACCAACGTGC GCGTCATGGG CCTGCTCGGC
AGCGATGGCG TGGATACCGC GCTGCTCGGC AACCTGAGCG CGATCGTCGC CTTCTGA
 
Protein sequence
MTTGSSGSSA GQAAPSPAPA PPAQSGSAPS QPIERLVIEG QLGLRVDDID QTMATLRAKV 
GELRGSLVRE QLGGGASSRN ANIRIRVPPA AVEDFVAWLG QQGEVTHQFI ERTDVSRQFI
DQAIALENLQ LTLDRTRALL QREDLDIQQV LVIEGELTRL RGRIEQIKGE QRWLENRVAQ
ATLNVNLRSE TEVFLRPSAK FYPGPRLTGL YFLDREDGPK GRLGGGAALY FTPQTSVELD
VFAGRDGGSS GLLTTIGGSV YSDFLGRGRR RFFNPHLGMR LGFAHFDAPS FAFGADAGVE
LFKHEYLMID TNVRVMGLLG SDGVDTALLG NLSAIVAF