| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5314 |
|---|
| Symbol | |
|---|
| ID | 8547726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7309412 |
|---|
| End bp | 7310068 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646389988 |
|---|
| Product | translation elongation factor Ts |
|---|
| Protein accession | YP_003269692 |
|---|
| Protein GI | 262198483 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0783881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTG TTACAGCTTC GATGATCAAG GATTTGCGCG AGCGCACCGG CTCGGGCATG
GCCGACTGCA AGAAAGCTCT CGTCGAGTGC GAGGGCGATA TCGACAAGGC CATCGAGTTC
CTGCGCAAGA AGGGCCTGGC CAAGGCCGAG AAGAAGGCCG GCCGCATCGC GGCCGAGGGC
CTGGTGAGCG CCTACATTCA TGGTGAGGGC CGCATCGGCG TGCTGCTCGA GGTCAACTGC
GAGACCGACT TCGTGGCTCG CAACGACGAG TTCGTGCAGT TCACGCGCGA CGTCGCCATG
CAGATCGCGG CGCTCAATCC CCAGTACGTG CGCGCCGAGG AGATCCCCGA GGACGCGGTC
GCGCGCGAGC GCAACATCCG CGTCGAGGCC GCCAAGGAGT CGGGCAAGCC CGAGGCCGTG
GTGACCAAGA TGGTCGAGGG TCAGATCGCC AAGTGGAAGA AGGAGATCTG CCTGCTCGAG
CAGCCCTTCA TCAAGGACGA CAAGAAGACC ATCCACGACC TCACCCAGGC GCTGGTCGCC
AAGCTGGGCG AGAACATCCA GGTGCGTCGT TTCACGCGCT TCGAGCTCGG CGAGGGCCTG
GAGAAAAAGC AGGACGACTT CGCCGCGGAA GTGGCCAAGC AAGCCGGTCT GGCGTAA
|
|---|
| Protein sequence | MAAVTASMIK DLRERTGSGM ADCKKALVEC EGDIDKAIEF LRKKGLAKAE KKAGRIAAEG
LVSAYIHGEG RIGVLLEVNC ETDFVARNDE FVQFTRDVAM QIAALNPQYV RAEEIPEDAV
ARERNIRVEA AKESGKPEAV VTKMVEGQIA KWKKEICLLE QPFIKDDKKT IHDLTQALVA
KLGENIQVRR FTRFELGEGL EKKQDDFAAE VAKQAGLA
|
|---|
| |