Gene Hoch_5274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5274 
Symbol 
ID8547686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7251720 
End bp7252526 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID646389948 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003269652 
Protein GI262198443 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGG TAAACGCAGC TCAGCGAAAC AACGCTCGCC TCGTCGGCAG CGGCGAACAG 
ACGCTCATCC TGGCCCACGG CTTCGGTACC GATCAGAACG CGTGGCGCCG CATTCAGGAG
CCGCTGGCCG CGGACTATCG GCTGCTGCTC TTCGACCACG TCGGCGCCAC GGCCGAGAGC
GCCCAGTACT TCAGCCCGCG GCGCTATCAA TCGATGCACG CCTACGCGGC CGACCTGCTC
GAGCTGCTCA CCGAACTCGA CATCGAGGAC GCCTACTACC TGGGCCACTC GATGAGCGCC
ATGATCGGCG TCCACGCGGC GCTGAGCGAG CCCGAGCGCT TCCGCAAGCT GCTGCTGCTC
AACGGCACGC CCTGCTACGC GAACCAGGTG GACGGCTACC GCGGCGGCTT CGAGCGCAGC
GACATCGACA GCCTGTACGA CTCGATGGCC GGCAACTACC AGGGCTGGGT CGGTGGCGTG
GCCGCGCTCG GCATGGGCAA CCCCGAGCGC CCCGAGCTGG CGGCCGAGTT CGCCGAGTCG
CTGTCGGCCA TGCGTCCGGA TATCGCGCTG GCCATGGCCC ACGCGATCTT CGATCCCGAC
CACCGCGACC AGCTCGCCGC GCTCACGGTG CCGAGCGTGG TCCTGCAGGC CATCGAGGAC
GCCTTCGTGC CGCTCTCGGT GGCGGAATTC ATGGCCGAGA CGATTCCCGA CGCGGAGCTG
TGCCCGATCG CGGCCAGCGG CCACTTGCCG CATATCAGCG CGCCCGAGCA GGTGCTGGCG
GCGTTGCGAA GTCACCTTGA CAGCTAG
 
Protein sequence
MEMVNAAQRN NARLVGSGEQ TLILAHGFGT DQNAWRRIQE PLAADYRLLL FDHVGATAES 
AQYFSPRRYQ SMHAYAADLL ELLTELDIED AYYLGHSMSA MIGVHAALSE PERFRKLLLL
NGTPCYANQV DGYRGGFERS DIDSLYDSMA GNYQGWVGGV AALGMGNPER PELAAEFAES
LSAMRPDIAL AMAHAIFDPD HRDQLAALTV PSVVLQAIED AFVPLSVAEF MAETIPDAEL
CPIAASGHLP HISAPEQVLA ALRSHLDS