Gene Hoch_5186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5186 
Symbol 
ID8547598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7138625 
End bp7139527 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content73% 
IMG OID646389863 
ProductAcyl-CoA thioesterase-like protein 
Protein accessionYP_003269567 
Protein GI262198358 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG ACGCTGCTCG CGATGCCGCC GATTTGAGCG CCGATACCGC GGTCAAGCCC 
CTGCTGTCTT CCCCGGGGCT ATTCACGGCC GATCTCTCGG AGCGCTGGAG CTTCGCCGTG
CCCTCGGGCG GCGTGCTGAT GTCGATGGCC CTGCGCGCCA TGCAGATGCA GCTCGACGAG
CCCGGTCTGC GCCTGCTGTC GGCCCACGCC ATCTTCTGCG CCCCGGTCTC GGCCGGCGCC
GTCACCATCC GCGTCGAGGT GCTGCGGGTC GGCGGCAGCG CGGCCCAGGT GCGCGCCTCG
CTGGCTTCGC AGGGGCGTCC GGGCGCCAGC ATCGAGCTCA TGGCCACCTT CGCGCGCAAG
CGCAGCGGCC CCGAGATCAC GGGCGCGGTG TTTCCCCAGG TACCCGGGCC CGAGCAGGCC
GAGCCCATGC CCACGGCCGC CGAGGCCCCT GACAATCCCC TGGCCACGGC GGCCTTCTTT
CGCAACGTCG AGTGTCGCCG CGCCCTCGGG CCGCGCTGGT GGAGCGGCGA CGGAGGTCCC
GCCGAGGCGC CGCGCAGCGC GCGCTGGTTG CGCTACCTCA AGCCCCCGCG CGACGCCCGC
GGCAACCTCT CGCGCCTGGC CATTCCGCCG CTGGCCGACA CCATGGCGCC GGCCGTGTGG
CAGGCCCTGG AGCCCGGTCG GCCGCCCATC CAGGCGCCCA GCCTGGACCT CACCGTGCAC
TTTCTCGAGG ACACCCGCGC CGAGTGGCTG CTGGCCTCGG CCTACGCGCG GCACGTGAGC
CAGGGCTACG CCAGCGCCGA GATCGAGATC TGGTCGGAGG AGCGCAAGCT CATCGCCTAC
GGCACCCAGA CCATGACCTT CCGGCCCATG CAGCGCCGCT CGGCCGGCAA GGGCAGCGCG
TGA
 
Protein sequence
MSDDAARDAA DLSADTAVKP LLSSPGLFTA DLSERWSFAV PSGGVLMSMA LRAMQMQLDE 
PGLRLLSAHA IFCAPVSAGA VTIRVEVLRV GGSAAQVRAS LASQGRPGAS IELMATFARK
RSGPEITGAV FPQVPGPEQA EPMPTAAEAP DNPLATAAFF RNVECRRALG PRWWSGDGGP
AEAPRSARWL RYLKPPRDAR GNLSRLAIPP LADTMAPAVW QALEPGRPPI QAPSLDLTVH
FLEDTRAEWL LASAYARHVS QGYASAEIEI WSEERKLIAY GTQTMTFRPM QRRSAGKGSA