Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_4049 |
Symbol | |
ID | 8546450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5557259 |
End bp | 5558338 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388726 |
Product | Histone deacetylase |
Protein accession | YP_003268441 |
Protein GI | 262197232 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.248474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.645592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCG GCTACGTTCT CGACGACGTC TTCACCGAGC ACCGACCGCC GGGTTCGCAT CCCGAGCGGC CCGAGCGTAT CGGCGCGGTG CGGGATGCGC TGCGCGCGGC GCATCTGCGC GAGCGCGCCA CGCTCCTCCC GGTGCGTGAG GCCAGCGAGG ACGAGCTTGG TCGCGTGCAT CACGCCGGCT ATCTGTCCGA TCTCACGCGC ACCGTGCCCG GGCAGAGCGG CTGGCTCGAC GGCGACACCT ACTTCTCGCC CGGGACCTGG GAGGCCGTGC TCAAGGCCGC CGGGGCCGTG GTCGATGTCG CCCTGGGCGT GCTCGACGCT CGCTTCCAGC GCGGCATGGC GCTGGTGCGG CCGCCCGGAC ATCACGCCGA GGCCGACCGG GCCATGGGCT TCTGCCTCAT CAACAACATC GCCGTGGCGG CGGCGGCCGC GCGCGCGGCC GGGGCGGCGC GGGTGGCCAT CGTCGATTGG GACGTCCACC ACGGCAACGG CACGCAGCAC ATCTTCGAGG AGGATCCCTC GGTGCTGTTC CTGTCGTGCC ATCAGTACCC GTTCTATCCC GGCACGGGCG CGCCCTCCGA GGTCGGCCGC GGGGCCGGGG TCGGGGCCAC GGTCAACGTC GGGCTGCCCG CGGGCGCGGG CGATCGCGCG TACATGGCGA CCATGAACGA GGTCTTTGCG CCCGCGCTGC GGCGCTTTCA GCCCGATATC ATCCTGCTCT CGGCCGGCTT CGACGCCTAC GTCGATGACC CGCTGGCCGG CATGCGGGTG AGCCTCGGCG GCTTTCGCGC GCTGGCCGGG ACGCTGGCGC GGCTGGCCGA TGAGCTGTGC GGCGGTCGGC TGGCGTGCGC GCTCGAGGGC GGATATCACC TCAAGGGGCT GGGGGCCGGG ACCGTGGCGC TGCTCGATGC CTTCGAGCAT CCCAGCGCTG AGGCCGAGGT GATCGAGGGC GATGGCGAGG CGCCCGATCC GATCATTGAT TCGCCCGTGC TCGAGCCGCG CGCGCGGGCC GCGATCGATG CGACCCTGGC CGCGCTCGAT GCCGCCGGCG GCGTGCGCGC GCCGTCGTGA
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Protein sequence | MAIGYVLDDV FTEHRPPGSH PERPERIGAV RDALRAAHLR ERATLLPVRE ASEDELGRVH HAGYLSDLTR TVPGQSGWLD GDTYFSPGTW EAVLKAAGAV VDVALGVLDA RFQRGMALVR PPGHHAEADR AMGFCLINNI AVAAAAARAA GAARVAIVDW DVHHGNGTQH IFEEDPSVLF LSCHQYPFYP GTGAPSEVGR GAGVGATVNV GLPAGAGDRA YMATMNEVFA PALRRFQPDI ILLSAGFDAY VDDPLAGMRV SLGGFRALAG TLARLADELC GGRLACALEG GYHLKGLGAG TVALLDAFEH PSAEAEVIEG DGEAPDPIID SPVLEPRARA AIDATLAALD AAGGVRAPS
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