| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4019 |
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| Symbol | |
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| ID | 8546415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5520131 |
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| End bp | 5520838 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646388691 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_003268411 |
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| Protein GI | 262197202 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.534035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGAA AGACTTATAA CAAGGCAGTC GAGCAGATCG ACCGCAAGCA GCGCTACACC
GTCGAAGACG CTTGCGCCCT GATCCCGAAG TCCAAGATCT CGTCCAAGTT CGACGAGACG
GTGGACGTGG CCGTGCGTCT CGGTGTCAAC CCCAAGTACG CGGATCAGAT GGTGCGCGGC
GCCATCGTGC TGCCGAACGG CACCGGCAAG TCGGCGCGCG TGCTGGTGAT CGCCAAGCCC
GAGAAGGCCA AAGAGGCCCT CGAGGCGGGC GCCGATTACG CCGGCAGCGA CGAGTACATC
AACAAGATCA AAGACGAGAA CTGGTTCGAG TTCGACTCGG TCGTCGCCAC CCCAGACATG
ATGGGCCAGG TCGGCAAGAT CGGTCGCATC CTCGGCCCCC GCGGCCTGAT GCCCAACCCC
AAGGTGGGCA CGGTGACCGT GGACGTGGTC AAGGCTGTGC GCGAGCTCAA GGCCGGTCGC
GTCGAGTTCC GCGTCGAGAA GGCCGGCATC GTCCACTCGC CCATCGGCAA GGCGTCGTTC
TCACCCGAGA AGCTGGCCGA GAACCTCCAC GCGCTGCTGG ACATGCTGCT CAAGCTCAAG
CCCTCGACCG CGAAGGGCAC CTACCTGCGG TCGGTGACCA TCTCGACCAC GCACGGTCCG
GGCATCAAGA TCGATACCGC GACGGCGGTT GCGCTGCCGG CCGCCTGA
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| Protein sequence | MSGKTYNKAV EQIDRKQRYT VEDACALIPK SKISSKFDET VDVAVRLGVN PKYADQMVRG
AIVLPNGTGK SARVLVIAKP EKAKEALEAG ADYAGSDEYI NKIKDENWFE FDSVVATPDM
MGQVGKIGRI LGPRGLMPNP KVGTVTVDVV KAVRELKAGR VEFRVEKAGI VHSPIGKASF
SPEKLAENLH ALLDMLLKLK PSTAKGTYLR SVTISTTHGP GIKIDTATAV ALPAA
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