Gene Hoch_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4006 
Symbol 
ID8546402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5497763 
End bp5498071 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content63% 
IMG OID646388678 
Productribosomal protein S10 
Protein accessionYP_003268398 
Protein GI262197189 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0232097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.70609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC CCAGAATTCG GATTCGACTC AAGGCTTACG ACCACGGTCT GCTCGACCAG 
TCGGCGAGCG AGATCGTGGA GACCGCCCGC CGCACTGGCG CCAAGGTGGC CGGCCCGATT
CCGCTGCCGA CCAAGATCAA CAAGTACTGC GTGCTGCGCT CTCCCCACGG AGACAAGAAG
TCGCGCGAGC AGTTCGAGAT CCGCACCCAC AAGCGCCTGC TCGACATCCT CGAGCCGACG
CAGCAGACCC TGGACGCCTT GATGAAGCTC GACCTGTCCG CTGGCGTGGA CGTCGAGATT
CGCACCTGA
 
Protein sequence
MNTPRIRIRL KAYDHGLLDQ SASEIVETAR RTGAKVAGPI PLPTKINKYC VLRSPHGDKK 
SREQFEIRTH KRLLDILEPT QQTLDALMKL DLSAGVDVEI RT