| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3973 |
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| Symbol | |
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| ID | 8546369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5475039 |
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| End bp | 5475866 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388645 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003268365 |
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| Protein GI | 262197156 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.155103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCATGG ACAAGGTCTA CCCGCACGGC GGCCGCGATG TGCAGGTGCT GCGCGATGTC
GATCTGCTGC TCGAGCCCGG GGAGATGGTG GCCATCGTCG GCGCCTCGGG CGTGGGCAAA
TCCACGCTGC TGCAGATCCT GGGCACCCTC GACGTGCCGT CCTCGGGCAA GCTGCTGATC
AACGATCAGG ACATCACCTC CATGGGGCCG GCGCGGCTGG CGCAGTTTCG CAACCGCGAG
ATCGGCTTCG TGTTCCAGTT CCACCACCTG CTGCCCGAGT TCACGGCGCT CGAGAACGTG
ATGATGCCGG CGCTCATCCA GCGCATCGCG CGCAACAAGG CCGAGCGGCG CGCGCGCGAT
GTGCTCGGCC GGGTCGGGCT CTCGCATCGG CTCACGCACA AGCCCTCGGA GCTGAGCGGC
GGCGAGCAAC AGCGCGTGGC TCTGGCGCGG GCGCTGGTCC TCGAGCCCTC GCTGCTGCTG
GCCGACGAGC CCACGGGCAA CCTCGACAAG CGCACGGGCG AGTCCATTCA CGAGCTGTTC
GTCGAGCTCA ACCGCGAGCG TGGCTCGACC CTGCTCGTGG TCACGCACAA CCCTGAGCTG
GCGGCGCTGA TGCCGCGCTG TCTGCACATG CTCGACGGCG GTGGCCTGGC CGAGCGCGTG
CAAAGCGAAC CGTACAACAC CCCCGTGACT GCCGCGCCGG ACGCGGCGGT CGCTCCCGGC
GATGGGTCCG CCGAGGCTGC CGACGCACCG TCGGCGCAGG ACCTGCCCGA CGCCGACCCC
CCCTCGGCGT CCGGCGCGCA CGACTCACCC TCGCAGGAAT CCCGATGA
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| Protein sequence | MAMDKVYPHG GRDVQVLRDV DLLLEPGEMV AIVGASGVGK STLLQILGTL DVPSSGKLLI
NDQDITSMGP ARLAQFRNRE IGFVFQFHHL LPEFTALENV MMPALIQRIA RNKAERRARD
VLGRVGLSHR LTHKPSELSG GEQQRVALAR ALVLEPSLLL ADEPTGNLDK RTGESIHELF
VELNRERGST LLVVTHNPEL AALMPRCLHM LDGGGLAERV QSEPYNTPVT AAPDAAVAPG
DGSAEAADAP SAQDLPDADP PSASGAHDSP SQESR
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