Gene Hoch_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3712 
Symbol 
ID8546102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5110656 
End bp5111507 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content75% 
IMG OID646388379 
ProductPBS lyase HEAT domain protein repeat-containing protein 
Protein accessionYP_003268105 
Protein GI262196896 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.13018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.417711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC GCAAACTGAC CAAACCCATC CTCCTGGCCA CCGCCGTGGC CTCGGTCCTG 
GCCCTGAGCA GCTCGGCTCT GGCCGGCCGC GGCGGCAGCC ACTCGCGCAT TCAGAACGCC
ATCATCTCGG GCAGCGCCGA GGCCCTGATC TCCGAGATCG AGCGCGCCGA GCGCCTGGTG
TGCTCGAGCG CGTGCATCGC CACCATGATG GCGCTGCTCG AAGACGGCCG CTACGAGGTC
CGCGAAGCCG CGGCCTGGTG GTTCGCCCGC CGCCCGGCGC AGAAGGCCGA GCTCACCGAG
CGCTCGCTGG CCTTCCTCAG CGGCAGCGAC TCCACGGCCG CGCGCAACGC GGCCGACATC
CTCGGCGCCT TCCGCCACCC GCTCGCGGTG CCGGCGCTCG CCGACGCCGC CGTGCGCCAG
GACCTGTCCG CCGAGGCCCG CCAGCACGCG GTGCGCTCCC TCGGCCTGAT CCGCGCCACC
ACCGGTAAGG CGGCCGTGGC CGAGGCCATG AGCGACCCCG ACGCCAGCGT GCGCCTCGAG
GCCGCCGCCG CCTGGCTGAT CATGCGCGAC CAGCAGGACG CCGCGCCCGT GGTCGCGCTG
CTCGACGACG ACGACGTGCT GGTGCGCCGC AAGGCCGCCG CGGTCGCCGG CAAGCTGCGT
GAGGCCAGCG CCCGCGCCGC GCTCGAGAGC CTGGCCGTGA GCGACGAGGA CGCGCTGGTG
CGCCGCCACG CCGCCTGGGC CCTGGGCCAG ATCGGCGACC CGGCCTCTCG GCCCGCGCTC
GAGAGCGCGC GCGACGACGC CTCGGCCATT GTCCGCGGCG TCGCTCGCGC GGCGCTGCGC
GATCTCCGCT GA
 
Protein sequence
MNFRKLTKPI LLATAVASVL ALSSSALAGR GGSHSRIQNA IISGSAEALI SEIERAERLV 
CSSACIATMM ALLEDGRYEV REAAAWWFAR RPAQKAELTE RSLAFLSGSD STAARNAADI
LGAFRHPLAV PALADAAVRQ DLSAEARQHA VRSLGLIRAT TGKAAVAEAM SDPDASVRLE
AAAAWLIMRD QQDAAPVVAL LDDDDVLVRR KAAAVAGKLR EASARAALES LAVSDEDALV
RRHAAWALGQ IGDPASRPAL ESARDDASAI VRGVARAALR DLR