Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3712 |
Symbol | |
ID | 8546102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5110656 |
End bp | 5111507 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388379 |
Product | PBS lyase HEAT domain protein repeat-containing protein |
Protein accession | YP_003268105 |
Protein GI | 262196896 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.13018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.417711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCC GCAAACTGAC CAAACCCATC CTCCTGGCCA CCGCCGTGGC CTCGGTCCTG GCCCTGAGCA GCTCGGCTCT GGCCGGCCGC GGCGGCAGCC ACTCGCGCAT TCAGAACGCC ATCATCTCGG GCAGCGCCGA GGCCCTGATC TCCGAGATCG AGCGCGCCGA GCGCCTGGTG TGCTCGAGCG CGTGCATCGC CACCATGATG GCGCTGCTCG AAGACGGCCG CTACGAGGTC CGCGAAGCCG CGGCCTGGTG GTTCGCCCGC CGCCCGGCGC AGAAGGCCGA GCTCACCGAG CGCTCGCTGG CCTTCCTCAG CGGCAGCGAC TCCACGGCCG CGCGCAACGC GGCCGACATC CTCGGCGCCT TCCGCCACCC GCTCGCGGTG CCGGCGCTCG CCGACGCCGC CGTGCGCCAG GACCTGTCCG CCGAGGCCCG CCAGCACGCG GTGCGCTCCC TCGGCCTGAT CCGCGCCACC ACCGGTAAGG CGGCCGTGGC CGAGGCCATG AGCGACCCCG ACGCCAGCGT GCGCCTCGAG GCCGCCGCCG CCTGGCTGAT CATGCGCGAC CAGCAGGACG CCGCGCCCGT GGTCGCGCTG CTCGACGACG ACGACGTGCT GGTGCGCCGC AAGGCCGCCG CGGTCGCCGG CAAGCTGCGT GAGGCCAGCG CCCGCGCCGC GCTCGAGAGC CTGGCCGTGA GCGACGAGGA CGCGCTGGTG CGCCGCCACG CCGCCTGGGC CCTGGGCCAG ATCGGCGACC CGGCCTCTCG GCCCGCGCTC GAGAGCGCGC GCGACGACGC CTCGGCCATT GTCCGCGGCG TCGCTCGCGC GGCGCTGCGC GATCTCCGCT GA
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Protein sequence | MNFRKLTKPI LLATAVASVL ALSSSALAGR GGSHSRIQNA IISGSAEALI SEIERAERLV CSSACIATMM ALLEDGRYEV REAAAWWFAR RPAQKAELTE RSLAFLSGSD STAARNAADI LGAFRHPLAV PALADAAVRQ DLSAEARQHA VRSLGLIRAT TGKAAVAEAM SDPDASVRLE AAAAWLIMRD QQDAAPVVAL LDDDDVLVRR KAAAVAGKLR EASARAALES LAVSDEDALV RRHAAWALGQ IGDPASRPAL ESARDDASAI VRGVARAALR DLR
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