Gene Hoch_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3582 
Symbol 
ID8545972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4935629 
End bp4936420 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content74% 
IMG OID646388251 
ProductIndole-3-glycerol-phosphate synthase 
Protein accessionYP_003267977 
Protein GI262196768 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.433048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.034535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCC TGGCCCGCAT CCTCGAGCGC AAACGCGACG AGCTGGCCGA CGCCAAGCGC 
CTGCGGCCGT TCGCGGCGCT CGCCGACCAG GCCGCGAGCG CGCCGCCCAC GCGCGGGTTT
GCCAGCGCGC TGCGGCGCCC CGATGGCGCC CCGGTGCGCG TCATCGCCGA GATCAAGCGG
GCCTCGCCCT CGGCCGGCCC CATCCGCCCC GGCGCCGACC CCGCGGACAT CGGCGCCATG
TACCAGGCCG CCGGCGCCGC CGCCATCTCG GTGCTCACCG ACGAGTCCTT CTTCGACGGA
CACCTCGACT TTCTCGCCCG CGTGCGCGCG GTCACCGAGG TGCCGCTGCT GCGCAAGGAC
TTCCTCATCG ACCCCTACCA GGTGGTCGAA GCCCGCGCCG CCGGCGCCGA CGCCGTGCTG
CTGATCGTCG CCGCGCTCGA GCACGAGCTC TTGGCCCAGC TCCTGGCCGA GGCCCGCACC
TACGGACTCG ACGCCCTGGT CGAGGTCCAC GACGCCGACG AGGCCGAGCG CGCGGTCGCT
GCCGGCGCCG AGATCATCGG CGTCAACCAC CGCAACCTGC GCACCTTCGA GGTCGATACC
GGCCTCACCG CGCAGCTCCG TCCGCTGCTG CCCAAAGACG CCATCGCGGT CGGCGAGAGC
GGCGTGCGCT CGGCCGCCGA TGTGCGCCGC CTGGGCGAGG CCGGCGCCGA TGCCGTGCTC
GTGGGCGAAC GCCTGATGCG CGAGTCCCAT CCCGGCGAGG CGCTCGCCGC GCTGATGGGC
ATCGGCGCAT GA
 
Protein sequence
MSILARILER KRDELADAKR LRPFAALADQ AASAPPTRGF ASALRRPDGA PVRVIAEIKR 
ASPSAGPIRP GADPADIGAM YQAAGAAAIS VLTDESFFDG HLDFLARVRA VTEVPLLRKD
FLIDPYQVVE ARAAGADAVL LIVAALEHEL LAQLLAEART YGLDALVEVH DADEAERAVA
AGAEIIGVNH RNLRTFEVDT GLTAQLRPLL PKDAIAVGES GVRSAADVRR LGEAGADAVL
VGERLMRESH PGEALAALMG IGA