| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3457 |
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| Symbol | |
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| ID | 8545846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4776148 |
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| End bp | 4777155 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388125 |
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| Product | low-density lipoprotein receptor YWTD repeat protein |
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| Protein accession | YP_003267852 |
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| Protein GI | 262196643 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0967146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCGC GATGGACCCC GGTACTGCTG TGTGTGCTCG CGACCACCGC GCTCGGCTGT
GGCCGGCTCG GCTTCGACGA GCTTGGCTTC GACGACCCCG GCGGTGCCCC CGACGCGGCC
GCCGACGCGG GGATTGCGGA CGCGCGGACG ACAACGCCGG ACGCGCTGCC CGACGCGCTG
CCCGACGCCG GCAGCCCGCC ACCGTCGGCG AAGGCCCTGT ACTGGACCGA TCCCGAGGAG
CGCATCCTCG GCGGTCTGCC GCTCACCGAA GACGGCGCCG AGCCGAGCAA AGCGCTCAAG
CTGCGCGGCG ATCTCTCGGA GCCAGCCGGG TTGCTCGTGG TCCCGGGCGA TGCCTTTTAC
TGGCTCGAGG TCGAGCGCGG CACGCTGATG CGCGCCGACC CGAAGTTTAC CTCGGTGGAC
GTCGTGACCG ACGGGCTGGA GGCGCCCGAG GGCCTGGGGC TGGGCCCCGA CGGCTTCCTG
TACTGGACCG ACGGCGGCAC CGGCCGCATC GAGCGCGTGC GGCCCGACGG CAGCGATCGC
GAATCCATTC TCAGCGACGG CGTGGACAAG CCCTTTGGCC TGGCCATCGA CGCCGAGGGC
GGCTTCATCT ACTGGGTCGA TAGCGGCACC TTCTCGATCC GACGCGTCGG CCTGCCACCC
GATAACGGCC AGCAGGCTGA GATCGTCCTG CGACAGGTAA GCGCCGACGA TCTGTCCTTC
GATCCCGCCA CGCGCACCCT GTACTGGACC AGCATCACGC CGCCCGCCAT CTTCCGCGCC
AGCGTCGACG AGGCCGTGGG GATCAGCCCC GAGAAAGTCG CCGACGTCGA CGGCGTGCCC
AACGGCCTGG TCATCGACCC GGAGGCGCAG CTCATCTACT GGAGCGAGCT GACGCCGGCG
CGGCTGATGC GCATGGACTA CGACGGCGGC AACGTGCGCG TGCTGCTCGA GCAGAACGTG
CTGCGAGTGC CCCAGCTCCT GTTCCCCGAG AGCCTGGCGC TCAACTGA
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| Protein sequence | MSPRWTPVLL CVLATTALGC GRLGFDELGF DDPGGAPDAA ADAGIADART TTPDALPDAL
PDAGSPPPSA KALYWTDPEE RILGGLPLTE DGAEPSKALK LRGDLSEPAG LLVVPGDAFY
WLEVERGTLM RADPKFTSVD VVTDGLEAPE GLGLGPDGFL YWTDGGTGRI ERVRPDGSDR
ESILSDGVDK PFGLAIDAEG GFIYWVDSGT FSIRRVGLPP DNGQQAEIVL RQVSADDLSF
DPATRTLYWT SITPPAIFRA SVDEAVGISP EKVADVDGVP NGLVIDPEAQ LIYWSELTPA
RLMRMDYDGG NVRVLLEQNV LRVPQLLFPE SLALN
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