| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3299 |
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| Symbol | |
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| ID | 8545687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4551556 |
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| End bp | 4552725 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387966 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_003267694 |
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| Protein GI | 262196485 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.212433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.550694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGCAT CCAACCCGAG CAATCCCCCG CGGCGCACGC CGCTCTACGC CGCCCACGAG
GCCCTGGGCG GCAAGATCAT CGACTTCGGC GGCTGGGCCC TGCCGGTGCA GTACAGCCCC
GGCATCATCA AGGAGCACAA GCACGTGCGC GAAGCCGTCG GCCTGTTCGA CGTCTCGCAC
ATGGGCGAGG CCTCGCTGCG CGGACCGCGC GCGGCCGAGG CCGTGCAGCG CCTGGTGACC
AACGACGTCG GCAAGCTGGT CGACGGCGCC GCCATGTACA CGGTCATGTG TTACGAGCAC
GGCGGCATCG TCGATGACTG CATCGTCTAC CGCCGCAGCG CCGAGAACTA CCTCATCGTG
CTCAACGCGG CCAACACCGC CAAGGACCTG GCGTGGATCC GCGAGCACGC CGAGCCCCTC
GGCGCCGAGG TCGTCGACGA GAGCGACGAC ACCGCGCTCA TCGCCGTCCA GGGGCCCAAG
GCCGTGGCCC TGGTCGATCG CCTCAGCCCG GCCGAGCTCA GCCAGATCGC GCCCTTTCAC
TTCGCCTCGG CCGAGGTCGC CGGCGTCGCC TGCGCGGTCG CGCGCACCGG CTACACCGGC
GAGGACGGCT TTGAGCTGGC GTGCGCGGCC GGCGACGCCA TGCGCGTGTG GGAGGCGCTG
CTCGAGGAGG GCGAGAGCGA CGGCGCCATG CCCATCGGCC TGGGCGCGCG CGACACCCTG
CGGCTCGAGG CCAAGCTGTG CCTCTACGGC AACGACATCG ACGAGACCAC CAACCCCTAC
GAGGCCGGCC TGGGCTGGGT GGTCAAACCC GCGGCCGGCG ACTTCGTCGG CAAAGCCGCC
CTGGCCGCGG TCAAGGACAG CGGCCCGCAG CGCAAGCTGG TCGGCTTCCG CATCGACGGG
CGCGGCATCG CGCGGCCCGG CTATGACGTG CTCGATCGCT CACTCGCCGC CGAGTCCGCG
GGCGCTCAGG ACGGCGCTCA GAGTCCCGGC CAGGTCATCG GCAAGGTCAC CAGCGGGACC
AAAGGCATCT CGGTAGACGG CGCCATTGGC ATGGCGTATG TACCCAGCGC CTACGCCGCC
GCGGGCACCA GCTTGACCAT CGACTGCCGC GGCAAAGACG CCAGCGCCAC CGTCGTCAAA
GGCAAATTCC TCAAGCGCGC GGACGCGTAA
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| Protein sequence | MAASNPSNPP RRTPLYAAHE ALGGKIIDFG GWALPVQYSP GIIKEHKHVR EAVGLFDVSH
MGEASLRGPR AAEAVQRLVT NDVGKLVDGA AMYTVMCYEH GGIVDDCIVY RRSAENYLIV
LNAANTAKDL AWIREHAEPL GAEVVDESDD TALIAVQGPK AVALVDRLSP AELSQIAPFH
FASAEVAGVA CAVARTGYTG EDGFELACAA GDAMRVWEAL LEEGESDGAM PIGLGARDTL
RLEAKLCLYG NDIDETTNPY EAGLGWVVKP AAGDFVGKAA LAAVKDSGPQ RKLVGFRIDG
RGIARPGYDV LDRSLAAESA GAQDGAQSPG QVIGKVTSGT KGISVDGAIG MAYVPSAYAA
AGTSLTIDCR GKDASATVVK GKFLKRADA
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