Gene Hoch_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3244 
Symbol 
ID8545632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4468903 
End bp4469448 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content72% 
IMG OID646387911 
Productprotein of unknown function DUF192 
Protein accessionYP_003267639 
Protein GI262196430 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.130785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCC GTCTCGCCGC CCTCACGCTC CTGTCGCTGC TGGTCTGCTC GCTGGGCTGC 
TCGCCCTCGG GCAGCGCCGC CACCAGCGCG CGCAACGCCC CCGTCGCGGC CGAGGCGCCA
GCCTCCGCCG AGCCGAGCGG CGCCGCCGCG ACGCAGGATC CGGCCCAGGC TCCGGCCGTG
ATCCTCGAGC CCCCGGGTCA CCCGCCGTCC TCGGTCACGG TCGAGATCGC GCGCACGCCC
GAGCAAGTGC AGCGCGGGCT CATGTATCGC GAGCACCTCG ACGCCGACGC CGGCATGCTG
TTCCTCATGG GCGAGGAGCG CATTCAGTCG TTCTGGATGC GCAACACGCT CATCCCGCTG
GACATGATCT TCATCGCCAA GGACATGCGC GTGGCCGGGG TGGTCGAATA CGCCGAGCCG
CTCACCCAGA CCAGCCGCCG CGTGGCCGCG CCCTCGAGCT ACGTACTCGA GGTCAACGGC
GGCTGGGCGG CGGCCCACAA CATCGCCGCG GGCACGCCGG TGCGCTTCCA CAACGTCGAG
GAGTGA
 
Protein sequence
MRTRLAALTL LSLLVCSLGC SPSGSAATSA RNAPVAAEAP ASAEPSGAAA TQDPAQAPAV 
ILEPPGHPPS SVTVEIARTP EQVQRGLMYR EHLDADAGML FLMGEERIQS FWMRNTLIPL
DMIFIAKDMR VAGVVEYAEP LTQTSRRVAA PSSYVLEVNG GWAAAHNIAA GTPVRFHNVE
E