Gene Hoch_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1546 
Symbol 
ID8543928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2105990 
End bp2107807 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content66% 
IMG OID646386256 
Producthypothetical protein 
Protein accessionYP_003265991 
Protein GI262194782 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGACT TTTCACGCCG CAGCTATCAT GAACTCGTCA GCGATGCGCT CACACGCCTC 
GTCGGCGGTG TCGCCGGAGA GCGGCTCAAC TTTCGCGAGG AGGGGCGCGC GGAGGGATTT
GCGCTCGAGC GCTATCCGGT CCAGGAGCTC TTGCGCGTGA GCGTGCGCAG TGGAGGCGAG
ATGCAGATTC TGCCCCGAGA CGCGATCGCG CTGAGCGATG ATCGCAGTCG GCTGCTGATC
CTGCCCGCCA TCCGCATCGA GGACGGAGCA TCGCTATTCG TCGACTACGT GCCCGCCAGC
AGCAATTCGC CCATCACCGA CACCAACGTG GGGGGCGCGG CTCGCACTCT GGTCGAGACG
CTGGTGCGAG AGATGGCGCT GTTTTACAAC AAACTCGAGC TGGTCTACCG CAGCGCGTTT
CTCGACACGG CTGCTGGCGA GGCCCTCGAT CAGGTGGTCG CGCTGCTCGG TGTCAAACGC
GTACGCGCGG GCAGCCCTTC GGTGATCGTC ACGTTCTCGC GCGCCACGGT GGCGACCAGC
GATGTGATCG TCCCGGCCGG AACGATCGTG TCCACCGGCG TCCGCGCCGA CGGTACCGAG
GTTCGCTTCG AAACCGTTCA TCAGGTGTTG CTGCAGCAGG GCACGCGCGA GGTCGATGTC
GAGGCGCGGG CCACGAGCGA TTCCGAACGC CTGGCCGAAG AGGTCACGGC GGGCCTGGTC
CGGATCATGC CCCGGCCGGT GGCCGGAATC GAGCGCGTCT ACAATCACGC CCCGGTGCAT
CGCAGCATCG CCGACGAGGT CGATGAGGCG CTGCGTCTGC GCAGCAAGCT CGCGCTACAG
GGCGCTGGCA AGGTCACGGT CGACGCGCTG CGCTCGGCGA TTCTCGACCA GGGGGCGCTC
GCGGTGGTGG TGCGCGACAT GCCGCGCGGC GTCCCGGGAG AGGTCGAAGC CTTCATCGAC
TTGCCCGAGT ACGACGACGC GGACGTGACG CGTGCCCACG AGGATCGCAT CCTCTTGGCC
GTAGACCGAA CGCGTGGCGC AGGCGTGCGC GTGTTCACCA ATTTTGCCCG CAAGGTCTAT
GTGCGCATCG GCCGGCTGGG CCTGATGCTG CGCGAGGGCC TGAGCCCCAC TGACGACGAG
CGGACCGAAC TCCGCAGCGC GGTCAAGCGC GCCATACTCG GATACGTGTC CAAGCTGCCG
CCGGGGGAGT CGATCACGCG CAGCGCTCTG ATCGCCGCCG CCCTCGCCGA CGAGCGACTG
CGCGAGGTCA CGCTGGCCGC GGTCGAGACC TACCAGGAAG ATCGACTGAC TCGGACGCCA
GGCGCCGATG AGGCGCCCCA ACGCGTGCAC GATACCGCCG TGCGCCTGCT CGACGCGGCC
GGTGCGCCTG TGGCCGCGCT CGGCGCCGAG CTTACATTCT CATCGATCTA TATCGCCAAG
GATGAAACTG CCGTTATCGT CCTACCGGAC GAAATCGAGC TGGTCACGCG CGAGAGGCGC
ATCGTACACG CGGTCATCGT CGATGTGGAG TTCCGAATCA CTCCCGTAGA TCCGCTGGCG
GATCGCGACG CGCTGCGCGA TCGTGTACTG GCACAGCGTA TCGAGCCGAC GATACGGGCG
TTCTTCGACG TGCTCAAGGA CGGCCAGAGC GTGAATCTGG CTGAACTTCT CGATCTGCTC
GACAGTCGCC ATTACTCGCT CGAGAACGCA TTCGTCGATG CTCTCTACGT CCGTGATCAG
CGCGTGCTGC TGGGCGTGAG CGCGGTGCCG GTCGCCGACG ATGAGCGGGC CGAGCTCGGG
GAGTTGAGGG TGCGATGA
 
Protein sequence
MLDFSRRSYH ELVSDALTRL VGGVAGERLN FREEGRAEGF ALERYPVQEL LRVSVRSGGE 
MQILPRDAIA LSDDRSRLLI LPAIRIEDGA SLFVDYVPAS SNSPITDTNV GGAARTLVET
LVREMALFYN KLELVYRSAF LDTAAGEALD QVVALLGVKR VRAGSPSVIV TFSRATVATS
DVIVPAGTIV STGVRADGTE VRFETVHQVL LQQGTREVDV EARATSDSER LAEEVTAGLV
RIMPRPVAGI ERVYNHAPVH RSIADEVDEA LRLRSKLALQ GAGKVTVDAL RSAILDQGAL
AVVVRDMPRG VPGEVEAFID LPEYDDADVT RAHEDRILLA VDRTRGAGVR VFTNFARKVY
VRIGRLGLML REGLSPTDDE RTELRSAVKR AILGYVSKLP PGESITRSAL IAAALADERL
REVTLAAVET YQEDRLTRTP GADEAPQRVH DTAVRLLDAA GAPVAALGAE LTFSSIYIAK
DETAVIVLPD EIELVTRERR IVHAVIVDVE FRITPVDPLA DRDALRDRVL AQRIEPTIRA
FFDVLKDGQS VNLAELLDLL DSRHYSLENA FVDALYVRDQ RVLLGVSAVP VADDERAELG
ELRVR