Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1546 |
Symbol | |
ID | 8543928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2105990 |
End bp | 2107807 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646386256 |
Product | hypothetical protein |
Protein accession | YP_003265991 |
Protein GI | 262194782 |
COG category | [S] Function unknown |
COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGACT TTTCACGCCG CAGCTATCAT GAACTCGTCA GCGATGCGCT CACACGCCTC GTCGGCGGTG TCGCCGGAGA GCGGCTCAAC TTTCGCGAGG AGGGGCGCGC GGAGGGATTT GCGCTCGAGC GCTATCCGGT CCAGGAGCTC TTGCGCGTGA GCGTGCGCAG TGGAGGCGAG ATGCAGATTC TGCCCCGAGA CGCGATCGCG CTGAGCGATG ATCGCAGTCG GCTGCTGATC CTGCCCGCCA TCCGCATCGA GGACGGAGCA TCGCTATTCG TCGACTACGT GCCCGCCAGC AGCAATTCGC CCATCACCGA CACCAACGTG GGGGGCGCGG CTCGCACTCT GGTCGAGACG CTGGTGCGAG AGATGGCGCT GTTTTACAAC AAACTCGAGC TGGTCTACCG CAGCGCGTTT CTCGACACGG CTGCTGGCGA GGCCCTCGAT CAGGTGGTCG CGCTGCTCGG TGTCAAACGC GTACGCGCGG GCAGCCCTTC GGTGATCGTC ACGTTCTCGC GCGCCACGGT GGCGACCAGC GATGTGATCG TCCCGGCCGG AACGATCGTG TCCACCGGCG TCCGCGCCGA CGGTACCGAG GTTCGCTTCG AAACCGTTCA TCAGGTGTTG CTGCAGCAGG GCACGCGCGA GGTCGATGTC GAGGCGCGGG CCACGAGCGA TTCCGAACGC CTGGCCGAAG AGGTCACGGC GGGCCTGGTC CGGATCATGC CCCGGCCGGT GGCCGGAATC GAGCGCGTCT ACAATCACGC CCCGGTGCAT CGCAGCATCG CCGACGAGGT CGATGAGGCG CTGCGTCTGC GCAGCAAGCT CGCGCTACAG GGCGCTGGCA AGGTCACGGT CGACGCGCTG CGCTCGGCGA TTCTCGACCA GGGGGCGCTC GCGGTGGTGG TGCGCGACAT GCCGCGCGGC GTCCCGGGAG AGGTCGAAGC CTTCATCGAC TTGCCCGAGT ACGACGACGC GGACGTGACG CGTGCCCACG AGGATCGCAT CCTCTTGGCC GTAGACCGAA CGCGTGGCGC AGGCGTGCGC GTGTTCACCA ATTTTGCCCG CAAGGTCTAT GTGCGCATCG GCCGGCTGGG CCTGATGCTG CGCGAGGGCC TGAGCCCCAC TGACGACGAG CGGACCGAAC TCCGCAGCGC GGTCAAGCGC GCCATACTCG GATACGTGTC CAAGCTGCCG CCGGGGGAGT CGATCACGCG CAGCGCTCTG ATCGCCGCCG CCCTCGCCGA CGAGCGACTG CGCGAGGTCA CGCTGGCCGC GGTCGAGACC TACCAGGAAG ATCGACTGAC TCGGACGCCA GGCGCCGATG AGGCGCCCCA ACGCGTGCAC GATACCGCCG TGCGCCTGCT CGACGCGGCC GGTGCGCCTG TGGCCGCGCT CGGCGCCGAG CTTACATTCT CATCGATCTA TATCGCCAAG GATGAAACTG CCGTTATCGT CCTACCGGAC GAAATCGAGC TGGTCACGCG CGAGAGGCGC ATCGTACACG CGGTCATCGT CGATGTGGAG TTCCGAATCA CTCCCGTAGA TCCGCTGGCG GATCGCGACG CGCTGCGCGA TCGTGTACTG GCACAGCGTA TCGAGCCGAC GATACGGGCG TTCTTCGACG TGCTCAAGGA CGGCCAGAGC GTGAATCTGG CTGAACTTCT CGATCTGCTC GACAGTCGCC ATTACTCGCT CGAGAACGCA TTCGTCGATG CTCTCTACGT CCGTGATCAG CGCGTGCTGC TGGGCGTGAG CGCGGTGCCG GTCGCCGACG ATGAGCGGGC CGAGCTCGGG GAGTTGAGGG TGCGATGA
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Protein sequence | MLDFSRRSYH ELVSDALTRL VGGVAGERLN FREEGRAEGF ALERYPVQEL LRVSVRSGGE MQILPRDAIA LSDDRSRLLI LPAIRIEDGA SLFVDYVPAS SNSPITDTNV GGAARTLVET LVREMALFYN KLELVYRSAF LDTAAGEALD QVVALLGVKR VRAGSPSVIV TFSRATVATS DVIVPAGTIV STGVRADGTE VRFETVHQVL LQQGTREVDV EARATSDSER LAEEVTAGLV RIMPRPVAGI ERVYNHAPVH RSIADEVDEA LRLRSKLALQ GAGKVTVDAL RSAILDQGAL AVVVRDMPRG VPGEVEAFID LPEYDDADVT RAHEDRILLA VDRTRGAGVR VFTNFARKVY VRIGRLGLML REGLSPTDDE RTELRSAVKR AILGYVSKLP PGESITRSAL IAAALADERL REVTLAAVET YQEDRLTRTP GADEAPQRVH DTAVRLLDAA GAPVAALGAE LTFSSIYIAK DETAVIVLPD EIELVTRERR IVHAVIVDVE FRITPVDPLA DRDALRDRVL AQRIEPTIRA FFDVLKDGQS VNLAELLDLL DSRHYSLENA FVDALYVRDQ RVLLGVSAVP VADDERAELG ELRVR
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