Gene Hoch_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0347 
Symbol 
ID8542727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp484673 
End bp485554 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID646385144 
Productfatty acid hydroxylase 
Protein accessionYP_003264881 
Protein GI262193672 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCG AAGTTCTCTC CGCAATCGTG ATCGTCTGCA GCGCGGTGCT GATCATCGCG 
CTGGAGTATC GCTTTCCCTA TGAGCGCCGG CAGCGTCTGC TGCGCGAGTG GTTGTGGAGT
GATCTGCTGC TGTACGGGCT GTTTCAGAGC CTGGGGCTCG GCATCGTCAT CGGTGCGCTG
ATCGCGTTCA TCGATCGCCA CACCGGGTGG TCGAGCTACG GGCTGCTGAG CGGTTGGCCG
ATCTGGGCGC AGGTGATGTT CTTCGTGCTC ACGCACGACT TCTACATCTA CTGCTTCCAC
CGCATGCAGC ACCGCTCGCG CTATCTGTGG CGGCTGCACG AGGCCCATCA CTCGGCCCGG
GACATCGACT GGATCGCGGG CTCGCGCTCG CATCCGCTCG AGATCTTCAT CAACCAGACC
ATCGAGTTTG CGCCCATGAT TTTGCTCGGC GCCCATCCCG TGGTGCCGGT CATCAAGGGC
GCGATCAGCG CGATCTGGGG CATGTGGATC CACTGCAACA TCGACGTCAA GTCGGGTCCG
CTGCAGTACG TCATCAACGG TCCCGAGATG CACCGCTGGC ATCACGCCAA GGACATCCCG
GGCCCGGAAG AGGGCCTGCC GGCCGAGGGC GCCAACTTCG CGACCAAGTT CGCCTTCTGG
GATTACCTGT TCGGCTCGGC ATTTCGTCCG CGTGACCGGA AACCGGCCGC GTACGGCTTG
TTCGACGACA ACGGGCCCTT CCCCGAGGAC TACTTCCGCC AGGTCGCGGC CGCGTTCCGG
CCCTTCCAGC CGGTGCCCAC CGATCCGGCG GGCGCGCACG AGCCCTCGAT GCTCAGCTCG
GAGAGCGGCG GCGAGCCGCC CCAGGTCGCG CGTCCGCAGT AG
 
Protein sequence
MSPEVLSAIV IVCSAVLIIA LEYRFPYERR QRLLREWLWS DLLLYGLFQS LGLGIVIGAL 
IAFIDRHTGW SSYGLLSGWP IWAQVMFFVL THDFYIYCFH RMQHRSRYLW RLHEAHHSAR
DIDWIAGSRS HPLEIFINQT IEFAPMILLG AHPVVPVIKG AISAIWGMWI HCNIDVKSGP
LQYVINGPEM HRWHHAKDIP GPEEGLPAEG ANFATKFAFW DYLFGSAFRP RDRKPAAYGL
FDDNGPFPED YFRQVAAAFR PFQPVPTDPA GAHEPSMLSS ESGGEPPQVA RPQ