Gene Hoch_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0303 
Symbol 
ID8542682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp437882 
End bp438616 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content71% 
IMG OID646385099 
ProductABC transporter related protein 
Protein accessionYP_003264837 
Protein GI262193628 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGA TTGAAACCCA CGCACTGAGC AAACGCTTCG GCGCGCTCGC CGCCGTCGAC 
CAGGTCGAGT TCGAGGTCCG CGCAGGCGAG ATCTTCGGAC TCATGGGCCA CAACGGCTCG
GGCAAGACCA CGCTCCTGCG CATGCTGCTC GGCCTGCTCG CGCCCAGCGG CGGTCGCGCG
AGCGTGTTCG GGCTCGACCC GCAGCGCGAC GCCCTGGCGG TGCGGCGGCG CTGCGGCTAC
CTGCCGGCCG AGTACACGCT GCCGCCCGAC ATGACGCCGC GCTCGCTGCT CGACTACATC
GCGGCCATGT TCGGACTGCC GGCCGAAGAA GCGCGCGCGC GCGCCGAGCA GCTCATCGAC
AGCTTCGACC TCGGCGCCGC GGCCGATCGC AAGCTGCGCG GCTTCTCAAC CGGCATGCTG
CAAAAGGTCG GCCTCGCGCA GGCGCTGATC AACGAGCCCG AGCTGCTCTT GCTCGACGAG
CCGACCTCGG GGCTCGACCC GCTGGGCCGG CACGATCTGC TCGAGCGGCT GCGTCATGCC
AGCGCCGAGC GCGGCACCAC GGTGGTGTTC TCGTCGCACA TTCTGAGCGA CGTCGAGGCG
CTGTGCAGCC GGGTCGCCGT GCTGCATCAC GGCCGGCTCA TCGCCTACGG CGCGCTCGAC
GAGCTCAAAC GCGAACACAA GGTCGCCGAC ATCGACGCCC TGTACCTGGC GCTGGCGCGT
CGCGAGGCCG CATGA
 
Protein sequence
MTAIETHALS KRFGALAAVD QVEFEVRAGE IFGLMGHNGS GKTTLLRMLL GLLAPSGGRA 
SVFGLDPQRD ALAVRRRCGY LPAEYTLPPD MTPRSLLDYI AAMFGLPAEE ARARAEQLID
SFDLGAAADR KLRGFSTGML QKVGLAQALI NEPELLLLDE PTSGLDPLGR HDLLERLRHA
SAERGTTVVF SSHILSDVEA LCSRVAVLHH GRLIAYGALD ELKREHKVAD IDALYLALAR
REAA