| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0194 |
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| Symbol | |
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| ID | 8542573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 290825 |
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| End bp | 292900 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646384990 |
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| Product | AAA ATPase central domain protein |
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| Protein accession | YP_003264728 |
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| Protein GI | 262193519 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.122239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCTC GCGTCGATCT GTGTCCGCTG GGCGGTGTGC GCGCCGTCCA GAACTTGCGC
GACCAGTCGC TGGTCCTGAT GGGCGATGGT GACGATCTGC GCTCGCTGCT GGAGCGCGTG
CCGGCCCTGA GCCTGGCGCC GCTCGACAGC GCCACGCTGG CGACTGCGCT GGCCGAGCTC
CGGCTCGAAG TCCACGATAT CGACGAACTC GACGCCGATA CGCCGCTGTA TCGTCCGCCG
CTCGCCGGCG CCACCCAGGC GCCCGGCGCG GGCCTCGCGA GGGCCGAAAG CGTGGCGGCA
ATTCGGCCCG TGCAGGTAGC GTCGGCCACC GAGGATGCCG CCGTGGCCAG CGCGCGCCCG
GCGGCCGCTC CGCCCGTGCT CCGCGCAGCC GCTCCCGGCG CGGCCGCGCG CGCCGATGGC
CCGCATCCGG ACACCGTGTC CGAAGACGAC GCCGTCGCCG TGGCCTACGG CGACGCCATC
GAGGAGATCG CCTCGTATCT GCGCGCCGGT CTGTCGGTGC TGGTGCTGTG CGACAAGCTC
GTGGTCCGGC ACCTGTGGCC GCGCATCGTG CGCGCGGCCG TGCGCGAGCC CCTGCATCTC
GACCCATCGT CCGCCCAGAC CACGGCGACG GCGATGAGCA GCGCCTCCGA GCTCGGCCCC
GAGCTGTCGC CCGCGAGCAA CCGCCCGGCC CAGCTCGACC GCCTGCGCGA CATGCTCGCC
TCCATGAAGC GCGGCCAGGT GATGGTCTTG CCGCACCTCG ACCTGCTGGG CGCCGGCGGC
GAGCGCGGCT TGAGCAACGA GGCCCGCACC CTGGCCAGGG TGCTCTACGA GTGGCCCGAT
CGCCTGCTGC TGGGCTTCGC CGACCACAGC CTGCCGCTAG CGCCGGTCAT CGCCGAGCGC
TTCGCCATCC GCCCCGAGCT GCGCGGTGTG CCGCGCGAGG TCCCGGCCGC CGAGGGCGCG
CGCCAGGTCC TGGGCCGGGC CATGCTCACG GCCGAGGAGG CCGCGCACTT CGCCGACTAC
GACGCCGGCG CGCTGTTCAA AAACGTCGCC GGGCTCAACC CCGTGCGGCT GCGCCACGCG
GTCGCCTACG CGGTGCATCA GGCGCGCGCG CGCGGTCACG ACAGCGAGCG TCCGGCGCCC
AGCAAGCTGC TCATCGACGC CATCCGCGCA TTCAAAATCC AGACCTCCTC GTCCTTCGAA
ATCCCCGAGG TCCGCATGGA CGACATCGGC GGCTACAGCG AGGTCAAGCG CACCCTGGGC
CGCGCCATCG ACCTCATCGG CGGCGCCTGG CAGCTCCCCG ACGAGGCCCT GCGCAGCGCG
CTCATCCCGC GCGGCTTTCT GCTGCACGGC CCGCCCGGCA CCGGCAAGAC CCTGTTCGCC
AAGGCCGTGG CCCACCGCCT CGACGCCGCG ATTCGCGTGG TCTCCGGGCC CGAGGTCACC
GACATGTTCG TCGGCGAGAG CGAGCGCAAC CTGCGCGAGA TCTTCGCCGA GGCCCGGCGC
AATGCGCCCA GCGTGCTGGT CTTCGACGAG TTCGACGCCA TCGCCGCCAG CCGCAGCGGG
CGCGCCGACG GCGGCAGCCG CGCGGGCAAC GCCATGGTCG CCCAGATCCT CACCGAGATG
GACGGCTTTC GCCCCGACGT GCCCATGCTG ATCATCGGCA CCACCAACCG CCTCGAGCTC
ATCGACGAGG CCCTGCTGCG CCCCAGCCGC TTCCAGGCCA TCTCCGTGGG CCTGCCGGAT
CTCGACGCGC GGCGCCAGAT CGCGGCGATT CACGCGGCCC GCTTCCACAT CCAGGTCGCG
CCCGAGCAGC TCCAGCACTT GGCCGCGATC TCGACCGGCA TGAACGGCGA CCAGCTCAGC
GCCGTGTTCC GCGACGCCTG CCTGGGCCTG CACTGCCAGC GTCCGCCGAT CGCGTTCGAC
AACGCGCGCA TGAAGGCCCT GGTCGACGCC CTGCGCGTGG ATCCGCGGCG GCGACGCGAT
GGTGTACATT CGAAACTCGA CATCCTGGCA TCCAAGGAGG TGCCGACGTC GCCGGACGCG
CCCAGCCCGC CGCCTCCGGC CGACGCCGCC GAGTGA
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| Protein sequence | MRPRVDLCPL GGVRAVQNLR DQSLVLMGDG DDLRSLLERV PALSLAPLDS ATLATALAEL
RLEVHDIDEL DADTPLYRPP LAGATQAPGA GLARAESVAA IRPVQVASAT EDAAVASARP
AAAPPVLRAA APGAAARADG PHPDTVSEDD AVAVAYGDAI EEIASYLRAG LSVLVLCDKL
VVRHLWPRIV RAAVREPLHL DPSSAQTTAT AMSSASELGP ELSPASNRPA QLDRLRDMLA
SMKRGQVMVL PHLDLLGAGG ERGLSNEART LARVLYEWPD RLLLGFADHS LPLAPVIAER
FAIRPELRGV PREVPAAEGA RQVLGRAMLT AEEAAHFADY DAGALFKNVA GLNPVRLRHA
VAYAVHQARA RGHDSERPAP SKLLIDAIRA FKIQTSSSFE IPEVRMDDIG GYSEVKRTLG
RAIDLIGGAW QLPDEALRSA LIPRGFLLHG PPGTGKTLFA KAVAHRLDAA IRVVSGPEVT
DMFVGESERN LREIFAEARR NAPSVLVFDE FDAIAASRSG RADGGSRAGN AMVAQILTEM
DGFRPDVPML IIGTTNRLEL IDEALLRPSR FQAISVGLPD LDARRQIAAI HAARFHIQVA
PEQLQHLAAI STGMNGDQLS AVFRDACLGL HCQRPPIAFD NARMKALVDA LRVDPRRRRD
GVHSKLDILA SKEVPTSPDA PSPPPPADAA E
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