Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1027 |
Symbol | |
ID | 8534174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1110551 |
End bp | 1111435 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383411 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003262910 |
Protein GI | 261855627 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.361847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGATC TGCGCCCTTG GCGTTGGCTG ATCGGGGTGA TCGATTACGG CGGATTGCAG GCGGCGGCGG ATCATTTCCA CCGGACGCCA TCCACACTCA GCCACGCCAT CAAGCAACTT GAATCTCAGG TCGGTTTGCC CTTGGTTGCT TATCAGGGGC GGCGGCTGAT ACTCACAGAG ATCGGGCAAC TGCTGACTTG CCGAATGCGG CCGGTGCTGC GTGATCTCGA TGGCGCTCAG GCACTGGCTA CCCAATTGGC ACAAGGGGTG GAGCCAGTGC TCTGTGTGGC TATTGACCAA ATTATTCCAT TGGCACTGAT TGCCGATGTT TTTTCGATCG TGTCTGAGTC CTATCCGCAA ACCCGCATCG AGCTCTTTGA GACCATTCTC GGCGGTGGTC CGGCGATGAT GCTGGAGGGA ACCGTAGGTT TGTATCTAGG CACCCAAATG GTGACGGGGA TGCCAACTAT TGCTTTGGAT CGCCTGAGGC TGGTTCCTTG CGCGGCACGT ACGCACCCGC TTGTAACCCA AGCAGGTGCT GAGGCGGGGC AGGTTACCGA GGCGGATTTG CGCCGCTACA GGCAAATCGT GATTCGAGAT TCGGCACCGA GTCGTTTAGC CAACGGAAGC TGGCTATCTG CCGAGCAGCG CTTTACGGTT GATCATTTAC ACACGGCGAT TGACTTGATC GAATCCGGGC TGGGTTTCGC TTGGCTTCCT GAAACACTGC TTTCAAGTCA TCCAGATTTA AGCATTTTGC AAATGGCTGA TACCGTTGCC GACGAAGCGG ATATCCATCT GGTTTTCGAT GCGGGATTCG CGTCTGGCTT GGCGGGCGCA CGCTTAATAG ATGAGATACG GGCCCGATTC GACACACGGG CCTAA
|
Protein sequence | MDDLRPWRWL IGVIDYGGLQ AAADHFHRTP STLSHAIKQL ESQVGLPLVA YQGRRLILTE IGQLLTCRMR PVLRDLDGAQ ALATQLAQGV EPVLCVAIDQ IIPLALIADV FSIVSESYPQ TRIELFETIL GGGPAMMLEG TVGLYLGTQM VTGMPTIALD RLRLVPCAAR THPLVTQAGA EAGQVTEADL RRYRQIVIRD SAPSRLANGS WLSAEQRFTV DHLHTAIDLI ESGLGFAWLP ETLLSSHPDL SILQMADTVA DEADIHLVFD AGFASGLAGA RLIDEIRARF DTRA
|
| |