Gene Hneap_0220 details

Gene Information

• Locus tag: Hneap_0220
• ID: 8533335
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 229934
• End bp: 232051
• Gene Length: 2118 bp
• Protein Length: 705 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646382598
• Product: PKD domain containing protein
• Protein accession: YP_003262130
• Protein GI: 261854847

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0937242
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGTT TATTTTTGTT TGTCTTTGCG TTGGTTTTAT CGCTTGGCCA TTTGCCAATC 
GTGAACGCGA CCACTTTTTT CTCTGAAGAT TTTGCGAGCA AATCACTCGG ACAAATGACC 
ACTGTCAATG TCGCTTCGAA TGCCAATTGG GTGTATGGCA GTTACCAAGG CGATGATTTT 
GCCAAGATGA ATGGCTACGG CGCAGATGTG GCAAGTGATG ACTGGCTGCT GACGCCCCAA 
ATTACTCTGC CTGCCGGTGC GGCCGCCAAT CTGTTTTACA CCACGATTAA AGGTTTTGAT 
GGTCCCGCGT TGCAAGCGAT GATATCTACC GATTACGATG GCTCAGGCAC GCCAACCGCT 
GTGCAAGCAG CCACATGGAC AACGCTGGGC GGTGCGCTGC CGACCAACAC AACGGGTTAC 
TCGTCCGCCA CATCATCTGG TCCCGTCGAT TTGTCGGCCT ACGCCGATCA AAAGGTCACG 
ATTGCCTTTC ATTACACATC GACTGGTACG GTCAGCGGGG CGGCGGCGAC ATGGGAGGTG 
CTTGATGTTC AGGTCGGCGA TGGTGGAGCG GCCCCTTCGG TGGCGGCCAG CGCCAGCGAA 
ACCTCGGTGT TGACACAAAC TCCATTGACC TTTAATGCCA AAATCAACGG TGGCACACCA 
CCGCTGCAAG CGGTTTGGCA GTTTTCTGAT GGACTCACGC AGACCGGTGC GCAAGTCCAG 
CATCAGTTCC TCAACCCGGG TGATTACACC GCTACAGTCA CCGTTACCGA CGCCAATGGC 
CTTTCAGCGA CAAGTGCACC TGTCAACGTT ACTGCGCTAA AGCCTCAAGC TTACGTATTG 
CCTGAGCCTA AAGGTACCCT CCGTGTTGCA ACTTTTAACA CCTATCTCAA TCGCACGGTA 
GAAGGTGAGC TGGCGGCTGA TCTGGGCGCG GGCGATGCGC AAGCGGCTGC GGTAGCCGAG 
ATTATCCAGC GCGTACGGCC TGATGTAATT TTGCTCAACG AATTCGATTA CGATCCGAGT 
GGTGATGCCT TAGATTTGTT TGAACGCCGT TATCTCGCCA TTGGGCAAAA TGGCGCGCAT 
TCTATCCAAT ATCCTTACCA CTATGTTGCG CCCGTCAACA CGGGGGTGCA ATCCGGTAAG 
GATCTTGATC ACAACGGTAC GCCGGGCGAT CCGGGCGATG CATTTGGCTT CGGCAGCTTC 
CCCGGTCAAT ATGGCATGGT GATCTTATCG ATGTATCCCA TCGAAGCAGA CAAGGTCCGC 
ACTTTCCAGA AGTTTTTGTG GAAAGACATG CCCAATGCCC TGTTGCCCAA GAATCCTGAT 
GGGAGCAGCT ACTACACTCC GGCTGAATTG GATGTATTCC GCCTGTCATC GAAATCGCAC 
TGGGATGTGC CCGTCTATGT GAATGGTAAA ACGCTACACA TACTGGCCAG CCACCCGACG 
CCCCCCGTAT TTGACGACGG CACCCTCGGC GTAGACAAAG ATGTGGTGGA TTGGAACGGC 
ACACGCAATC ACGATGAGAT CCGGCTCTGG GCCGACTACA TTGATCCCGC AAAAAGTGGT 
TACATCGTTG ACGATAAAGG CGGCAAAGGC GGTTTATCGG CCAACGCACG CTTCGTGATT 
GTCGGTGATG AAAACGCTGA TCCGAAAAAA GGAGATTCAA CCAATAAGGC GATCCTGCAA 
TTATTGGATA ACCCGTTGGT AACCGACACT GATCCGACAT CCATTGGGGC ACTGGATAAT 
ACTGATGCCC GTTTTGGTGC CAGTGCGGAT GACACCATTG AAGATGGCCT GCGCCTCGAT 
TACGTGCTGC CTTCGACCTT TGGCGTCACA GTCGATCAAG GTCAGGTTTT CTGGCCGGGA 
CGCACATATG ATTTATCCCG CTTGACGGGT TTCCAGACCG TGATCAGCTC CGATCACCGG 
ATGAACTGGC AAGATATGAC GCTTAACGTA ACCGCTGTCG ATGACGTCAT GCCCAGCGAG 
CCAGCCCCCG ATTCTGGCAA CACCGCCACA TCGAATGACG GCGGTTCCGG TGCTGTGGGT 
CCTTGGGCAC TATTGTTATT GACAGGCCCC CTGTTGCTGG CGCGAATCAT CCGTCGCAAG 
CACAACAATC CAGCCTGA 

 

Protein sequence

MKRLFLFVFA LVLSLGHLPI VNATTFFSED FASKSLGQMT TVNVASNANW VYGSYQGDDF 
AKMNGYGADV ASDDWLLTPQ ITLPAGAAAN LFYTTIKGFD GPALQAMIST DYDGSGTPTA 
VQAATWTTLG GALPTNTTGY SSATSSGPVD LSAYADQKVT IAFHYTSTGT VSGAAATWEV 
LDVQVGDGGA APSVAASASE TSVLTQTPLT FNAKINGGTP PLQAVWQFSD GLTQTGAQVQ 
HQFLNPGDYT ATVTVTDANG LSATSAPVNV TALKPQAYVL PEPKGTLRVA TFNTYLNRTV 
EGELAADLGA GDAQAAAVAE IIQRVRPDVI LLNEFDYDPS GDALDLFERR YLAIGQNGAH 
SIQYPYHYVA PVNTGVQSGK DLDHNGTPGD PGDAFGFGSF PGQYGMVILS MYPIEADKVR 
TFQKFLWKDM PNALLPKNPD GSSYYTPAEL DVFRLSSKSH WDVPVYVNGK TLHILASHPT 
PPVFDDGTLG VDKDVVDWNG TRNHDEIRLW ADYIDPAKSG YIVDDKGGKG GLSANARFVI 
VGDENADPKK GDSTNKAILQ LLDNPLVTDT DPTSIGALDN TDARFGASAD DTIEDGLRLD 
YVLPSTFGVT VDQGQVFWPG RTYDLSRLTG FQTVISSDHR MNWQDMTLNV TAVDDVMPSE 
PAPDSGNTAT SNDGGSGAVG PWALLLLTGP LLLARIIRRK HNNPA