Gene Hmuk_2590 details

Gene Information

• Locus tag: Hmuk_2590
• Symbol: rps4p
• ID: 8412137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halomicrobium mukohataei DSM 12286
• Kingdom: Archaea
• Replicon accession: NC_013202
• Strand: +
• Start bp: 2492125
• End bp: 2492646
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 645020932
• Product: 30S ribosomal protein S4P
• Protein accession: YP_003178403
• Protein GI: 257388630
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.325159
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 0.37704
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACTCG GATCCAACAC CAAGTTCTAC GAGACGCCGA ACCACCCCTA CCAGGGTGAA 
CGCATCGCCG ACGAGCAGAA CCTCATCGGC CGCTACGGCC TGAAGAACAA GGAGGAACTG 
TGGCGCGCAC AGTCCGAGCT CCGTAGCTAC CGACGCGAGG CCCGAAAGCT GCTGGGCCGA 
GCGGAGGGCG AGGGCTCCCG GTTCGAAGCC GACGAGTTCC TCACCCGACT CAAGCGACTG 
GGCGTCCTCA ACGAGACCGA CGCACTCGAC GACGTGCTGT CCCTCGACGT GACCGACGTG 
CTCGAACGCC GACTCCAGAC CGTCGTCTAC CGCAAGGGCT ACGCGAACAC GCCCGAGCAG 
GCCCGACAGT TCATCTCGCA CGGCCACATC GTCCTCGGTG ACGCCCGCGT CACCCGACCC 
GGCATGAAAG TCGAGGCCGA CGCGGAAGGC GAGGTCGGCT TCGACGAGCA CAGCCCGATC 
GCGGACGAAC TCCACCCAGA ACGAGCGGAG GCCCAAGAAT GA 

 

Protein sequence

MALGSNTKFY ETPNHPYQGE RIADEQNLIG RYGLKNKEEL WRAQSELRSY RREARKLLGR 
AEGEGSRFEA DEFLTRLKRL GVLNETDALD DVLSLDVTDV LERRLQTVVY RKGYANTPEQ 
ARQFISHGHI VLGDARVTRP GMKVEADAEG EVGFDEHSPI ADELHPERAE AQE