Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2401 |
Symbol | |
ID | 8411945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2304853 |
End bp | 2305605 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645020744 |
Product | proteasome subunit alpha |
Protein accession | YP_003178218 |
Protein GI | 257388445 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGAC AAAACCAACA GCAGGCCTAC GACCGCGGCA GCACCATCTT CTCGCCCGAC GGGCGACTCT ACCAGGTCGA GTACGCGCGC GAAGCAGTCA AGCGCGGCAC CGCGAGCATC GGCGTCAGGA CCAGCGGTGG CGTCGTGCTC GCCGTCGACA AGCGGATCCG GTCGCCGCTC ATGGAGCGGT CGTCGGTCGA GAAGATCCAC AAGGCCGACG ACCACATCGG GATCGCCAGC GCCGGCCACG TCGCAGACGC CCGCCAACTG ATCGATCTCG CCCGGCGACG GGCCCAGATC AACCGACTCC GCTACGAGGA ACGGATCGGC GTCGAGACGC TGACCAAAGA GATCACCGAC CACATCCAGC GATACACGCA GGTCGGCGGC GCGCGTCCGT TCGGCGTCGC GCTGATCATC GCCGGGGTCG CCGACGGCGA ACCCAGGCTG TACGAGACCG ATCCCTCCGG AACACCCTAC GAGTGGAAGG CCCTCGCCGT CGGTGCCGAC AGGGCCGACA CGCGGGCCTA CCTCGAAGAA CACTACTCGG AGACGCTGGC CCTCGACGGC GCGATCGGAC TCGCTCTCGA AACACTGGCC TCGGTCAACG ACGACGCGCT CGCGCCGGAG GCGGTCGGTC TCGCGACGGT CGACGCCGAG ACCGAACAGT TCCGCACGCT CTCGGACGAG GAGACGGAGA CACACCTCGC CGAGCGAGAC CTCCTCGCGG ACGGCGAGGA CCTCGAAGAG TAA
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Protein sequence | MQGQNQQQAY DRGSTIFSPD GRLYQVEYAR EAVKRGTASI GVRTSGGVVL AVDKRIRSPL MERSSVEKIH KADDHIGIAS AGHVADARQL IDLARRRAQI NRLRYEERIG VETLTKEITD HIQRYTQVGG ARPFGVALII AGVADGEPRL YETDPSGTPY EWKALAVGAD RADTRAYLEE HYSETLALDG AIGLALETLA SVNDDALAPE AVGLATVDAE TEQFRTLSDE ETETHLAERD LLADGEDLEE
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