Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2396 |
Symbol | |
ID | 8411940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2301956 |
End bp | 2302381 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645020739 |
Product | Protein of unknown function DUF54 |
Protein accession | YP_003178213 |
Protein GI | 257388440 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1325] Predicted exosome subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.719157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTCGG TCCCGTTTCA CTACGTCGAC CTGCGAGCGT TCGCCTACGC GACCGAAGAC GAAAAGCGGG TCGCCGAGGC GCTACAGACC TATCTCCCCG AGGAGACCGA ACTGGAGCGG GCCGAGTCGG AGGGCCACTA CGGCGACCGA ATCGTCGTCC TCTCGGCGCG GGTCGAGAAC GCGGACGACA TCCGCCACGT CCTCACGCAG GTCGCGGCGG TCGACGACCT CGAAACGGTG CTCGAAGAGC TGGACGACCG CGTCGACGCC AACTGTTCGT TCTTCCTCAC CTTCGACAAA CAGGCGGCGT TCGGGAACAG CGTCGAGCGA GGCGACGGGA TCACGCTCCG CGCGAAGGTC GAAGCCTACC CCGCCAAACG CGAGACAGCC ATCGAGAACG CGCAGGACGC CCTCTCGGAG CTGTGA
|
Protein sequence | MSSVPFHYVD LRAFAYATED EKRVAEALQT YLPEETELER AESEGHYGDR IVVLSARVEN ADDIRHVLTQ VAAVDDLETV LEELDDRVDA NCSFFLTFDK QAAFGNSVER GDGITLRAKV EAYPAKRETA IENAQDALSE L
|
| |