Gene Hmuk_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2396 
Symbol 
ID8411940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2301956 
End bp2302381 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID645020739 
ProductProtein of unknown function DUF54 
Protein accessionYP_003178213 
Protein GI257388440 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1325] Predicted exosome subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.719157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGG TCCCGTTTCA CTACGTCGAC CTGCGAGCGT TCGCCTACGC GACCGAAGAC 
GAAAAGCGGG TCGCCGAGGC GCTACAGACC TATCTCCCCG AGGAGACCGA ACTGGAGCGG
GCCGAGTCGG AGGGCCACTA CGGCGACCGA ATCGTCGTCC TCTCGGCGCG GGTCGAGAAC
GCGGACGACA TCCGCCACGT CCTCACGCAG GTCGCGGCGG TCGACGACCT CGAAACGGTG
CTCGAAGAGC TGGACGACCG CGTCGACGCC AACTGTTCGT TCTTCCTCAC CTTCGACAAA
CAGGCGGCGT TCGGGAACAG CGTCGAGCGA GGCGACGGGA TCACGCTCCG CGCGAAGGTC
GAAGCCTACC CCGCCAAACG CGAGACAGCC ATCGAGAACG CGCAGGACGC CCTCTCGGAG
CTGTGA
 
Protein sequence
MSSVPFHYVD LRAFAYATED EKRVAEALQT YLPEETELER AESEGHYGDR IVVLSARVEN 
ADDIRHVLTQ VAAVDDLETV LEELDDRVDA NCSFFLTFDK QAAFGNSVER GDGITLRAKV
EAYPAKRETA IENAQDALSE L