Gene Hmuk_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1261 
Symbol 
ID8410781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1193614 
End bp1194519 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID645019592 
Productnuclease (SNase domain protein) 
Protein accessionYP_003177089 
Protein GI257387316 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTC GGCGCTCACT GCTCGTCGCC CTGGTGGCCC TGGCCGCCCT CGCCGGCTGT 
CTCTCGGGCG GGCCACAGAC GCCAGCCGCG CCCGGCGACG CCGTCCCGGC AGGGAGCGAC
ACCGTCAACG CCACGGTCAC CCGCGTCGTC GACGGCGACA CCGTCGAGAT CCGATACGAC
GACGGGACGT TCGACACCGT CCGGCTGCTC GGGATCGACA CCCCCGAGAC CCGCGGCGGG
ACGAACCCCG CGGAGTTCGA GGGCGTCCCC GACACCGCGG CCGGCCGGGC CTGTCTCGAA
CGGGCCGCCG GCAACGCGAC CCGCGCCCTC GAAGCCCTCG TCGGCGGCGA GCCGGTCGTC
GTCGCTGTCG ACCCGCAAGC CGACCGACGG GATCGCTACG ATCGACTGCT GGCTCACCTC
GTCGTCGACG GCGTCGACGC CAACGAACGG CTCGTCGAGC GGGGCCACGC GCGGGTCTAC
GACAGCGCGT TCTCGCGCTC GGACCGGTTC TACGAGCACG AACGGGCCGC GCGGGACGCC
GGCCGCGGCG TCTGGGCCTG TGTGGACCCC GCCACGCCGA CTGGCGGCGT CGGCCTCCGG
GTCGTCGCCG ACGCCCCGGG CGACGACCGC GAGAACCCCA ACGGCGAGTA CGTCGTCGTC
TCGAACTCCG GGGGCGACCC GCTCGCGATC GGCAACTGGA CGGTCACCGA CGAGGCCGGC
CACAGGTACA CCTTCCCGCC GGGCGCGACG GTGCCCGCGA ACGGTTCGGT CCGACTCTAC
TCCGGTTCGG GGACCGACAC CGCCACCGAG TTCTACCGCG GGAACGGCCC GATCTGGAAC
AACGACGGCG ACACCGCCAC CCTGCGCGCC GCGAACGGCA CGGTCGTCGC CGCGGCGTCG
TACTGA
 
Protein sequence
MDRRRSLLVA LVALAALAGC LSGGPQTPAA PGDAVPAGSD TVNATVTRVV DGDTVEIRYD 
DGTFDTVRLL GIDTPETRGG TNPAEFEGVP DTAAGRACLE RAAGNATRAL EALVGGEPVV
VAVDPQADRR DRYDRLLAHL VVDGVDANER LVERGHARVY DSAFSRSDRF YEHERAARDA
GRGVWACVDP ATPTGGVGLR VVADAPGDDR ENPNGEYVVV SNSGGDPLAI GNWTVTDEAG
HRYTFPPGAT VPANGSVRLY SGSGTDTATE FYRGNGPIWN NDGDTATLRA ANGTVVAAAS
Y