Gene Hmuk_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0838 
Symbol 
ID8410353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp810002 
End bp811219 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content71% 
IMG OID645019174 
ProductTrkA-C domain protein 
Protein accessionYP_003176676 
Protein GI257386903 
COG category[S] Function unknown 
COG ID[COG3273] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCG AGGTGGCCTA CGAGCCGGTC AGCGTCAAGG CGGTGCTGGC CGAGATGAAA 
GACACCGCCG AGCTGTTGAT CGATCTCTCG TACTCGGCGG TGTTGCTGGG CAGCGACGAG
GTCGCCGCGG AAGTGCTCGA ACTCGAAGAG CGGATGGACG TGTTGCAGTT GCGCGCCCGG
ATGAGTCTGC TCATGGCCGC CCGGAACACG GAAGACGCCG AGGCGCTGGC TCCCGTGCTG
GGGATGGTCG GAGCCGCGGA GAAGATCTCC GATGCGGCCG GCGACATCGC CAAGGTCGTG
CTCGAAGACA TCGGCCTGCC GGAGGCGATG CGGGCCACCC TCCCGGAGGC CGTCGAGACG
ATCGTCCGTG CGACCGTCGC GCCGGGGTCG CGACTCGCCG ACGAGACGCT GGGCGACCTC
AACCTCGAAA CGGAGACCGG CGTCCGCGCC ATCGCGGTCC GGCGGGCCGG CGACTGGCTC
CTCAACCCCG ACGCCGAGAC GACCGTCGCG GCCGGCGACG TGGTGCTCTT TCGCGGCCCG
GACGACGGAA TCGGCGCGGT GTATCGGGAC GCGACCGGCG AGGGCTACGA GCCACCGGCA
CCGCCCGAGA GCGACATCGA GGACCTGGAG CGGGCCGTCG ACTCGATCGT GCTGATGAAG
GACATGGGCG AGCTGGCCGT CGATCTGGCC TACGGCGCGG TGCTGTTCGA CGACACGGAT
CTGGCCGAGG AGGTCGTCGA ACTCGAAGCC GAGGTCGACG CCCTCCAGTC CCGGTTCGAG
GCCTGGACGC TCCAGGCGGC CGGTCGCCAC GACGACCCGA TCTCGCTGCG CGGGCTCGTC
CACCTGGCCC GGGCGACGGA GGTGATCTCC GACGCCGCAC TGGAGATCAG CGAGGGCGTC
TTGCGGGGCC TCTCGACACA TCCCGTCGTC GCCGAGGCGG TCCGAGAGTC CGACGAGGTG
ATCGTCAGCG TCCCGGTCGC GGCCGACAGT GCCCTCGACG GCACCACGAT CGGACGACGG
CAGGTCAAGA CGGAGACGGG AATGCGGATC ATCGCCGTTC GCCACGCTGG CGCGAGCGAC
CGGACCGGAC GCGAGGGGGG CGACTGGGAG GTGTCACCGG GGCCGGAGAC GACGCTCGAA
GCCGGCGACG TACTGATCGC GAAGGGGACG CGCAGCGGTG CCGAGCGGTT CGGGGCGCTG
GCCGGCCAGC GCGACTAG
 
Protein sequence
MSTEVAYEPV SVKAVLAEMK DTAELLIDLS YSAVLLGSDE VAAEVLELEE RMDVLQLRAR 
MSLLMAARNT EDAEALAPVL GMVGAAEKIS DAAGDIAKVV LEDIGLPEAM RATLPEAVET
IVRATVAPGS RLADETLGDL NLETETGVRA IAVRRAGDWL LNPDAETTVA AGDVVLFRGP
DDGIGAVYRD ATGEGYEPPA PPESDIEDLE RAVDSIVLMK DMGELAVDLA YGAVLFDDTD
LAEEVVELEA EVDALQSRFE AWTLQAAGRH DDPISLRGLV HLARATEVIS DAALEISEGV
LRGLSTHPVV AEAVRESDEV IVSVPVAADS ALDGTTIGRR QVKTETGMRI IAVRHAGASD
RTGREGGDWE VSPGPETTLE AGDVLIAKGT RSGAERFGAL AGQRD