Gene Hlac_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3293 
Symbol 
ID7402439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp33592 
End bp34812 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content54% 
IMG OID643709850 
Productnucleoside 2-deoxyribosyltransferase 
Protein accessionYP_002567416 
Protein GI222481180 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTG CAGGTGGCGC GTACCACGAG TTGTGCCAGT TTCCTCCGGA CTCAGCTTTC 
TTCGGATCAG GTATACGAGC AGCCGCAGCT ACTGAGACCA CGGTCTCCTC TCGTAACCAA
CTCCACACCT GCATCGGCCC TGCCGACAAA GAGACACTCG AAACCTACGC GGCCACGTTT
AACTTCGACG TCACCACCAC CGAAATCCCG GAGACGGTCA GCTTCGACTA TTTGCATAAT
CACTCGAACC CTGTGCTCTC TCCGGCCGAG GCAGCCAACT ATAACCGCAA ACTTTCAGGA
GTTAGTGGAG ACGCAATCTT GCGATTCGGA CTGGTTGAAG GGACCGCGAT TGTTTCCGGT
AAGCGCGTCG TCTATGATCC TCAATCAGCG TCTCCCGTCC CGTTCAATGA AAATGGCTCA
ACTGCCGATG AACTCGCCCT CATCCTCAAC CGAAACGAAG CCGAGCAACT GGCTGGAGAA
GACGACTTAG AATCGATTTT CACAGAACTC ATGGCAGGTA CGACTGCCGC AGACGTAGTC
GTCCTCAAGC GGGGAGCGAA AGGGGCAATT GTCAGAACAT CCGGTATAAC GACCAAAATT
CCTGTTTTTC AGACGGAGTC TGTGTGGGGA ATCGGAAGTG GAGATGTGTT CAGTGCGGTC
TTTGCTGGGG AGTGGGCAGA AAACGGTGAA GATGCCGCAG ACGCTGCACT AACCGCTTCA
AAGGCGACAG CAACGTTCTG TAGACACCGC AGCCTGCCAA TTTCCAGAGC GGTCGTCGAA
TCAGTACCCA ACAGTGCTTC ACCGACATTC ATCTCACCGG ATGCTACCCC TCCGACGATC
TATCTGGCAG GCCCATTCTT CGACATTGGC GAGCGCTACG TTGTCGAAGA GGTCAAACAC
CTCCTGGAAA GCGAGGGAGC TGACGTGATT TCTCCCGTTC ACGATATTGG TCGAGCCGCT
GACTACGACA GTCCAGAGGA GGTAGCGCAG CAAGATTTAG ACGCAATTGA ACGGTCAGAT
CTCGTGTTCG CGTTATTGGA TCATTTGGAT TCTGGAACGC ACTTTGAAGT GGGATATGCC
CGGAAGGAGG GGACACCAGT TATCGGGTAT GCGAATGATT TCGAGATGGG CAGTGAAACC
ATGATTCGCG GCTCCGGGTG TAAGGTGTAC GAGGATCTGT CGTCTGCAAT CTATAATGCG
ATCTGGAGGG CGTATGCCTG A
 
Protein sequence
MIIAGGAYHE LCQFPPDSAF FGSGIRAAAA TETTVSSRNQ LHTCIGPADK ETLETYAATF 
NFDVTTTEIP ETVSFDYLHN HSNPVLSPAE AANYNRKLSG VSGDAILRFG LVEGTAIVSG
KRVVYDPQSA SPVPFNENGS TADELALILN RNEAEQLAGE DDLESIFTEL MAGTTAADVV
VLKRGAKGAI VRTSGITTKI PVFQTESVWG IGSGDVFSAV FAGEWAENGE DAADAALTAS
KATATFCRHR SLPISRAVVE SVPNSASPTF ISPDATPPTI YLAGPFFDIG ERYVVEEVKH
LLESEGADVI SPVHDIGRAA DYDSPEEVAQ QDLDAIERSD LVFALLDHLD SGTHFEVGYA
RKEGTPVIGY ANDFEMGSET MIRGSGCKVY EDLSSAIYNA IWRAYA