Gene Hlac_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2883 
Symbol 
ID7399117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp144336 
End bp145157 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content62% 
IMG OID643706701 
Productzinc finger SWIM domain protein 
Protein accessionYP_002564327 
Protein GI222475806 
COG category[S] Function unknown 
COG ID[COG4715] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTAA CCGAGGACGC GGTTCGGGAC ATCTGCACGG ACGCAGTCTT CGAACGGGGC 
GAACGATATC TTGCTGAGGG ACGTATCCAC GAGATTCACC GCGTCGACAC CACCGTAACC
GCCGTCGTGA GTGGCAGCCG TCAGTACGAT GTTCGTGTTG ACCTCGCCAC TGGCGGGTTT
GCCCCGTGGT GCGATTGTCC GTACGACGGG CCGGGTGCGT GTAAGCACGT TGTCGCCGTG
TTGCTTCGGT GTGTCGACGA CCCACCGTCA GACAACGGCG ATCGACTCGA TGCCGCACTC
GGTGGCGCCG ACGCCGACGA ACTGCGCGCG TTCCTGCGTG ATGAACTCGC GACCGATACG
GATCTCCGCG ATCGGTTTCT CGCCCGCGTC GGCGAGCCGA TGAGACAGTC GGTCGACGAG
CTTCGCACTT CGATCGACCG GCGGTTCGAA GAGACGAACC CTGAGTACCA CGTCGTCTTC
GAGCCCATCG ACTTCACGCA GTGGTTCGAT CTCGCAAACG AGCATCGCGA GCAGGGGCGG
GCCGCGTCGG CGGCAACCGT CTACCGGGCA CTCACCGAGT CACTCGACGA GAACATGGAG
CGCGTTGACG GTGCGTACGA CCATTTCTCG CGTGCATTTA GTCGGGCACT CGACGGATAT
GTTGACTGTG TCGCAGCTAC GGAACGCGAC GCTGATGCGG TCACTGACGC CGTCGCATTT
CTCACCGAGC GGGCGGTGTC GGGAACACCG TTCCTCGCGG AACACTTCGA GAAGGCCGCG
GTCGAACTCC AGGAAAAGAT AGATGAGCAG TCTTGCAAGT AG
 
Protein sequence
MDVTEDAVRD ICTDAVFERG ERYLAEGRIH EIHRVDTTVT AVVSGSRQYD VRVDLATGGF 
APWCDCPYDG PGACKHVVAV LLRCVDDPPS DNGDRLDAAL GGADADELRA FLRDELATDT
DLRDRFLARV GEPMRQSVDE LRTSIDRRFE ETNPEYHVVF EPIDFTQWFD LANEHREQGR
AASAATVYRA LTESLDENME RVDGAYDHFS RAFSRALDGY VDCVAATERD ADAVTDAVAF
LTERAVSGTP FLAEHFEKAA VELQEKIDEQ SCK