Gene Hlac_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2567 
Symbol 
ID7399792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2542606 
End bp2543355 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID643709639 
ProductAAA ATPase 
Protein accessionYP_002567209 
Protein GI222480972 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2874] Predicted ATPases involved in biogenesis of archaeal flagella 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACG ACAACCTGCT CTCGCTCGGC CTCGGCGAGC GCGACCGGCT GAACAAGGAG 
CTTGGCGGGG GGATCCCCCG CGGGAGCATC GTCCTCATGG AGGGCGACTA CGGCGCCGGC
AAAAGCGCCA TCTCCCAGCG GTTCGCCTAC GGACTCGTCG AAGAGGGCGC GTCGGTGACG
GTAATGTCGA CGGAGCTCAC CGTCCGCGGG TTCATCGACC AGATGCACTC GCTGGAGTAC
GACATGGTGA AGCCACTCCT TCAGGAGGAG CTGCTCTTCC TCCACGCCGA CTTCGACTCC
GGCGGAGCGT TCTCCGACGA CGACGGGGAG CGCAAGGAGC TGCTCAAGCG GCTGATGAAC
GCAGAGGCGA TGTGGAACTC CGATGTCATC TTCCTCGACA CGTTCGACGC AATCTTCCGG
AACGACCCAA CCTTCGAGGC GCTGGTTCGG AAAAACGAGG AACGACAGGC CGCCCTTGAG
ATCATCTCCT TTTTCCGGGA GATAATCTCA CAGGGGAAGG TGGTGGTGCT CACCGTCGAT
CCCTCGGCCG TCGACGACGA CGCGATCGGC CCGTTCCGGT CGATCGCCGA CGTGTTCCTC
CAGTTGGAGA TGATCGAGGT CGGCAACGAC ATCCGCCGGC AGATCAACGT GAAACGCTTC
GCGGGGATGG GTGAACAGGT CGGCGACACG ATCGGCTTTT CGGTCCGCTC GGGGACCGGA
ATCGTCATCG AGAGCCGCAG CGTCGCGTGA
 
Protein sequence
MPHDNLLSLG LGERDRLNKE LGGGIPRGSI VLMEGDYGAG KSAISQRFAY GLVEEGASVT 
VMSTELTVRG FIDQMHSLEY DMVKPLLQEE LLFLHADFDS GGAFSDDDGE RKELLKRLMN
AEAMWNSDVI FLDTFDAIFR NDPTFEALVR KNEERQAALE IISFFREIIS QGKVVVLTVD
PSAVDDDAIG PFRSIADVFL QLEMIEVGND IRRQINVKRF AGMGEQVGDT IGFSVRSGTG
IVIESRSVA