| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2562 |
|---|
| Symbol | |
|---|
| ID | 7399787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2537943 |
|---|
| End bp | 2539142 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643709634 |
|---|
| Product | CheC, inhibitor of MCP methylation |
|---|
| Protein accession | YP_002567204 |
|---|
| Protein GI | 222480967 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.348957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCG ACGTTCGGGC GCTCGGCGCC TGTAACCGGT TGGCAGAGCG GGGGGCCAGA
CAGGCCGCCG GCGCGCTCAC CGACCTGACA GGTACGGATC TCTCCGTGGA GGTCACGGGC
GCCAGCGTCG CCAGCGGCGA GGACCTCGCC GAGGCGTTCG CCGGCCGGGA GTCGATCGGC
GTGAGCGTCG GGCTCCGCGG CGGGCTGGAG GGCGAGGCAG TCCTCGCGTT CGACGCGGAG
AACGTCGACG CTCTGCTCTC GCTGTTACCC GGTGGGGCGT CGATGGGACG CAGCGCGGTG
ACGGAGGTCG GGAACATCGC GCTCGGCGGC TTCCTGGACG GCTGGGCGAA CTATCTCGGA
GCGGCGATAG ACATGACGCC GCCTCGGTAC TTCGAGGCCG ACGGCGCCGC CGTCCTGCCC
GACGGGGCGC TGGCCGGCGA CGGCGTGTTC CTCTTCGAGA GCCGGCTGGA CGCGACGACG
ACGGATCTGG ACTTCTCCAT CTACATGCTT CCCGACTCCG GGAAGTTCCG CGACCTCGTC
GTGGGCAAGA CCGCGCCGGC CGCGGCGTCG GGCGCGGACG GCGGGGCGGG GACCGACGGC
ACCGAGAGCA CCGCGATCCC GTACGAGTCG CTGTCGACGT TCGCGTCGCT GGCGAAGCGG
GGCTCCGCGA ACGCCGCCGA CAACATCGCG ATGATGACGG GCCTCGACAC GAGCGTCGAC
GTGAGCCGAC TCCGATTCGT CCCCCTCGCC GACGTACCCG CCGAAGTCGG CGTCGAGCCG
CACGCGGGGA CCGTCTTCGA ACTGCAAGGG GAGCCGAGCG GCTACCTCGC GATCCTCTTC
GAAGAGGAGT CCGCGGCGAA GATCGCCGCC TCGATGCTCC CCAGCGAGCC GGACGAGCCG
CTCGGCGGGA TGGCGGAGAA CGCGCTCTGC GAGCTCGGTA ACGTGATGAC GAGCGGGTTC
ATCGACGGGT GGGCGAACGT GCTCGGCACG TCGATCACCC ACTCGCCCCC GGAGTTCGTC
CACGACATCG GCTCGGCGGC GATCAGCCCG CTGGTCGCCA AGCTGAGTCG GCGGCAGGAC
TACGGGTTCG TAATCGACGC CGCGATTCAG ACGGAGGGCG TACAGGCGCG GTGCGACGTG
TACGCGCTCC CGGATGAGCG CGAACTGGCG CGGGCGCTCG ATCGGCTTTC GGAGCCGTGA
|
|---|
| Protein sequence | MRVDVRALGA CNRLAERGAR QAAGALTDLT GTDLSVEVTG ASVASGEDLA EAFAGRESIG
VSVGLRGGLE GEAVLAFDAE NVDALLSLLP GGASMGRSAV TEVGNIALGG FLDGWANYLG
AAIDMTPPRY FEADGAAVLP DGALAGDGVF LFESRLDATT TDLDFSIYML PDSGKFRDLV
VGKTAPAAAS GADGGAGTDG TESTAIPYES LSTFASLAKR GSANAADNIA MMTGLDTSVD
VSRLRFVPLA DVPAEVGVEP HAGTVFELQG EPSGYLAILF EEESAAKIAA SMLPSEPDEP
LGGMAENALC ELGNVMTSGF IDGWANVLGT SITHSPPEFV HDIGSAAISP LVAKLSRRQD
YGFVIDAAIQ TEGVQARCDV YALPDERELA RALDRLSEP
|
|---|
| |