| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2546 |
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| Symbol | |
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| ID | 7399771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2520767 |
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| End bp | 2523277 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709618 |
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| Product | Hef nuclease |
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| Protein accession | YP_002567188 |
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| Protein GI | 222480951 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1111] ERCC4-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.647176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG AGGCCACCGG CATCGACAGA CCCCTGCTCG TCGACGACTT CCTTCAGCGG
CGCCGCTACC AGCTCCAGCT CGCGGACGCC GCGGCCGACG AACACACACT CGTCTGTCTC
CCGACCGGTC TCGGCAAGAC GACGGTCAGC CTGCTCGTCA CCGCCGAGCG CCTCCACGAA
GTCGGCGGGA AGGCGCTCTT TTTAGCCCCC ACAAAACCCC TCGTCCAGCA GCACGCCGAC
TTCTACCGCG AGGCGCTCTC GATTCCGGAC GACGAGATCG TCGTGTTCAC CGGCGACGTG
AAACCCGACG ATCGCGCCGC GCTCTGGAAC GACGCCCGGA TCGTGATCGC GACTCCGCAG
GTCGTCGAGA ACGATCTGGT CGGCAACCGG ATCTCGCTGC GCGACGTGAC CCACTGCACC
TTCGACGAGT GTCACCGCGC GACCGGCGAC TACGCGTACG TCTACATCGC CGAGCGCTAC
CACGCCGACG CGGCCGACCC GCTCGTCACC GGGATGTCGG CCTCGCCCGG CGGCGACACC
GAGGAGATCG AGACGGTCTG TGAGAACCTC GGGCTCTCGA ACGTGGAAGT GATGACCGAG
GAGGACGCCG ACGTCGACGA GTACACCCAC GACACCGACG TGCAGTGGGA GCAGGTCACG
CTCCCCGACG AGGTCATCGC GATCCGCGAC GCCCTCAACG AGGTGATAAC CGACCGACTG
GAGAAGCTGA AGTCGCTCGG CGTGACGAAC AAGACAAGCC CCGACCTCTC CCAGCGCGAC
CTCAACGAGA TGCGCGGGAA GCTGAAGAAG ATGATGGACA ACGACCAGTC GGACGGGTAC
AAAGGGATGT CCACCCACGC CGAGGTGATG AAGCTCCGGC GTGCGACCGA GCTGGTCGAG
ACCCAGTCGG TCGAATCCGT TCGTCGCTAC TTCGAGCGCC AGCGCGAGGC CGCGCGCTCC
TCCGGTGCCT CGAAGGCGAG CCAGCGGATG GTCGCGGACC CCAAAGTGCG CGAGGCGATG
CGGAAGGCCG AGGCGTTCGA CGGGCTCCAC CCGAAGTTCT CGAAGGCCCG CATCCTGCTG
GCGGAGACGC TCGGGATCAA CGAGGGCGAG CGTGCCATTC TGTTCACCGA GTCCCGCGAC
ACCGCGGAGG CGCTCGTGGA GTTCCTCTCG ACGAGCTTCG ACGTGCGGAA GTTCGTCGGA
CAGGGCGACA AGGAGGGCTC CGACGGAATG AGCCAGAAAC AGCAACAGGA GACGCTCGAC
GAGTTCAAAG CCGGGGACTT CGAGGTACTC GTCTCCACGA GCGTCGCCGA GGAGGGGCTC
GACGTCCCAG AGGTCGATCT CGTCTGTTTC TACGAGCCGG TCCCGACCGC GATCCGCTCG
ATCCAGCGCA AGGGCCGGAC CGGCCGGCAG GCCGAGGGGA AAGTCGTCGT CCTGATGGCA
GAAGACACCC GCGACGAGGC GTTCTTCTGG ATCTCGCGGC GCCGCGAGAA GAAGATGGCC
AGCCAGCTCG CCGAACTGAA GGAAGCGACC GACGACATTG AAGAGACCGT CGACGATGGA
CAGGCGGGGC TCGACGCGTT CGCCGGGGGA TCCGCCGGGA ACGACACGAA GCCGGAAGCC
GACAATAGCG CGGCAGACAG TGACGATGGC GGCGACGACG ACAACACCGA CGCCGGACTC
ACCGACTTCG CGGCGGAGGC GCGAGACGGA GACGCCGATG GGGAGGATAA CGATGACGAC
GGAGGCGACG AGAGCGACGG GGGCGACGAG AGCGAGGGAG ACAGCGACGA TGCCGGCGAG
GTCGAGGCAA GCGAGGGGGA CAGCGACGAT GCCGGCGTCG TCGCGACCGC TGGCGTCGAC
GAGGGCGTCG AAGTCGTCGT CGATCAGCGC GAGCTCGACT CCACCATCGC GAAGGACCTC
TCGACGCGCG ACGGACTCGT CACCCGGCTG GAGACGCTCG CGGTCGGCGA CTACGTGCTC
TCCGACCGGG TTGCCGTCGA GCGCAAGTCG GCGGCGGACT TCGTCGACTC GATGCTCGAC
TCCGATCGGT CGATGTTCGA GCAGGTCGGC GAGCTCTCGC GGGCGTACGC CCGCCCCGTG
ATGGTCGTCG AGGGGACGAA CCTCTACGGC CAGCGCGACA TCGACCCCAA CGCGATTCGC
GGCGCGCTCG CGTCGCTCGC GGTCGACTTC GATGTGAGCG TCCTCCGCAC CGAGGGCGAG
TCGGACACCA CCGAACTGCT CGCGACGATC GCCAAGCGCG AGCAGGAGAC GCGGGACCGC
GAGGTGAGCG TCCACGGCGA GAAGACGGCG AAGACCCGCG CCGAACAGCA GGAGTACGTC
GTCTCCTCCA TTGCCGACAT CGGCCCGGTC ACCGCGCGCA CGCTTCTCGA ACACTTCGGC
ACCGTCGAGG CCGTGATGAC CGCGCCGGAG GACGACCTAC TGGAGGTCGA CGGGGTCGGC
CCGGTGACCG CCGAGCGCAT CCGTGAAGTC GTCGGGAGCG AGTACGAGTA A
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| Protein sequence | MATEATGIDR PLLVDDFLQR RRYQLQLADA AADEHTLVCL PTGLGKTTVS LLVTAERLHE
VGGKALFLAP TKPLVQQHAD FYREALSIPD DEIVVFTGDV KPDDRAALWN DARIVIATPQ
VVENDLVGNR ISLRDVTHCT FDECHRATGD YAYVYIAERY HADAADPLVT GMSASPGGDT
EEIETVCENL GLSNVEVMTE EDADVDEYTH DTDVQWEQVT LPDEVIAIRD ALNEVITDRL
EKLKSLGVTN KTSPDLSQRD LNEMRGKLKK MMDNDQSDGY KGMSTHAEVM KLRRATELVE
TQSVESVRRY FERQREAARS SGASKASQRM VADPKVREAM RKAEAFDGLH PKFSKARILL
AETLGINEGE RAILFTESRD TAEALVEFLS TSFDVRKFVG QGDKEGSDGM SQKQQQETLD
EFKAGDFEVL VSTSVAEEGL DVPEVDLVCF YEPVPTAIRS IQRKGRTGRQ AEGKVVVLMA
EDTRDEAFFW ISRRREKKMA SQLAELKEAT DDIEETVDDG QAGLDAFAGG SAGNDTKPEA
DNSAADSDDG GDDDNTDAGL TDFAAEARDG DADGEDNDDD GGDESDGGDE SEGDSDDAGE
VEASEGDSDD AGVVATAGVD EGVEVVVDQR ELDSTIAKDL STRDGLVTRL ETLAVGDYVL
SDRVAVERKS AADFVDSMLD SDRSMFEQVG ELSRAYARPV MVVEGTNLYG QRDIDPNAIR
GALASLAVDF DVSVLRTEGE SDTTELLATI AKREQETRDR EVSVHGEKTA KTRAEQQEYV
VSSIADIGPV TARTLLEHFG TVEAVMTAPE DDLLEVDGVG PVTAERIREV VGSEYE
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