Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2430 |
Symbol | rpl18p |
ID | 7400548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2417809 |
End bp | 2418366 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643709503 |
Product | 50S ribosomal protein L18P |
Protein accession | YP_002567075 |
Protein GI | 222480838 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAG GACCACGATA CAAGGTGCCG ATGCGGCGCC GCCGCGAGGT CCGGACGGAT TACCATCAGA GGTTGCGCCT GCTGAAATCG GGCAAGCCTC GCCTGGTCGC CCGGGTGAGC AACGCTCACG TCAGGGCGCA GCTGGTGACT CCCGGATCTG ACGGCGACGA GACCCACGCG GCCGCCTCCA GCGAGGAGCT CGGCGAGTAC GGCTGGGACG CCCCCACGGG CAATCTCCCC AGCGCGTACC TCACCGGGTA CCTCGCAGGC GCTCGCGCCG TCGACGCCGG CCTCGACGAG GCCGTCCTCG ACATCGGGCT CAACACGGCG ACGCCCGGCA ACAAGACGTT CGCAGTACAG GAAGGAGCGA TCGACGCCGG CCTCGAAATC CCGCACAACG ATGACGTGCT GGCCGACTGG TCGCGTACGC GTGGCGAGCA CATCGCCGCG TACGCCGAGC AGCTCGACGA GCCGCTGTAC AGCGGCGATT TCGACGCGGC CGACTTACCC GAGCACTTCG ACGACGTGCT CGCGACAATC CAGGAGGACC ATGAGTAG
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Protein sequence | MATGPRYKVP MRRRREVRTD YHQRLRLLKS GKPRLVARVS NAHVRAQLVT PGSDGDETHA AASSEELGEY GWDAPTGNLP SAYLTGYLAG ARAVDAGLDE AVLDIGLNTA TPGNKTFAVQ EGAIDAGLEI PHNDDVLADW SRTRGEHIAA YAEQLDEPLY SGDFDAADLP EHFDDVLATI QEDHE
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