Gene Hlac_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2430 
Symbolrpl18p 
ID7400548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2417809 
End bp2418366 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID643709503 
Product50S ribosomal protein L18P 
Protein accessionYP_002567075 
Protein GI222480838 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAG GACCACGATA CAAGGTGCCG ATGCGGCGCC GCCGCGAGGT CCGGACGGAT 
TACCATCAGA GGTTGCGCCT GCTGAAATCG GGCAAGCCTC GCCTGGTCGC CCGGGTGAGC
AACGCTCACG TCAGGGCGCA GCTGGTGACT CCCGGATCTG ACGGCGACGA GACCCACGCG
GCCGCCTCCA GCGAGGAGCT CGGCGAGTAC GGCTGGGACG CCCCCACGGG CAATCTCCCC
AGCGCGTACC TCACCGGGTA CCTCGCAGGC GCTCGCGCCG TCGACGCCGG CCTCGACGAG
GCCGTCCTCG ACATCGGGCT CAACACGGCG ACGCCCGGCA ACAAGACGTT CGCAGTACAG
GAAGGAGCGA TCGACGCCGG CCTCGAAATC CCGCACAACG ATGACGTGCT GGCCGACTGG
TCGCGTACGC GTGGCGAGCA CATCGCCGCG TACGCCGAGC AGCTCGACGA GCCGCTGTAC
AGCGGCGATT TCGACGCGGC CGACTTACCC GAGCACTTCG ACGACGTGCT CGCGACAATC
CAGGAGGACC ATGAGTAG
 
Protein sequence
MATGPRYKVP MRRRREVRTD YHQRLRLLKS GKPRLVARVS NAHVRAQLVT PGSDGDETHA 
AASSEELGEY GWDAPTGNLP SAYLTGYLAG ARAVDAGLDE AVLDIGLNTA TPGNKTFAVQ
EGAIDAGLEI PHNDDVLADW SRTRGEHIAA YAEQLDEPLY SGDFDAADLP EHFDDVLATI
QEDHE