Gene Hlac_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2370 
Symbol 
ID7401988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2362165 
End bp2362542 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID643709443 
ProductHSP20 type chaperone 
Protein accessionYP_002567015 
Protein GI222480778 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.40451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAG ACGACCGTGA CGATCCGTTC GGCGACTTCT TCGAGGAGAT CGAACGGATG 
ATGAACGAGA TGGCCAACGG GAACCCCGGA AGCGAGGACG CCGGCTTCGG CTCGGCGACG
CACGTGGACG CGTACACCAC CGACGACGGC GTGCGACTCG TCGCCGACCT CCCGGCCGTC
TCGAAGGATG AGCTCTCCCT GCAGTGCGAC GGGGAGGCGC TCACCATCTC TGCGGCGTCC
GATCGGCGGG AGTACGACGA AACCGTCGAA CTGCCCGTCC CGGTCGACGA GCACTCGGCG
GACGCGACGT TCAACAACGG CGTGTTGGAG GTCGTGTTCG ACCGCGACGA CGACTCCGCC
TCGATCGATC TGGAGTAG
 
Protein sequence
MDRDDRDDPF GDFFEEIERM MNEMANGNPG SEDAGFGSAT HVDAYTTDDG VRLVADLPAV 
SKDELSLQCD GEALTISAAS DRREYDETVE LPVPVDEHSA DATFNNGVLE VVFDRDDDSA
SIDLE