| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2140 |
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| Symbol | |
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| ID | 7400660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2130322 |
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| End bp | 2131626 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643709210 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_002566787 |
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| Protein GI | 222480550 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0116186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGG GAGATCGCGT CCGCGTCGAC CGCGGGGACG TCACGAACGA GGGCGTACTA
CTCCCCTCGA CGACTCACGA CCACCTCGTC GTCAAGCTCG ACGGGGGGTA CAACGTCGGT
ATCGACCGCG ACGAAGCCGA CGTGGAAGTG CTCGAATCCG GCGCCCGCGA CGTCGACGAG
GGCGCTGACG CGGGCGGTGG CGAGGCCTCC GAGATCACCT TCGACGGCGA CCTGCCGACG
ATCTCGCTCA TCTCTACCGG CGGCACCATC GCCTCCACCG TCGACTACCG GACCGGCGCG
GTCACCGCCC AGTTCGACGC CGAGGACGTG CTGCGAGCCG TCCCCGATCT GGCCGGGCGC
GCGAACTACC GCGGGCGCGT CGTCGCCAAC ATCCTCTCCG AGAACATGGA GCCGCCGATC
TGGCAGGAGC TCGCCGAGGC CGTCCGCGAG GAGATCGCCG CCGGCGCCGA CGGCGTCGTC
GTGATGCACG GCACCGACAC GATGCAGTAC TCCGCGTCCG CGCTCTCGTT CATGCTCGAC
TCGCCGGTTC CGATCGTGTT CACCGGGAGC CAACGCTCGG CGGATCGGCC CTCCTCCGAC
AACGTGATGA ACGCGGTCTG TGCCGTCGAG GCCGCGAAGG CCGACCACGC CGAGACGCTC
GTCTGCATGC ACGCGAGCCA GTCTGACGAC GCCTGCGCGC TCCACCGCGG CACCCGCGTC
CGGAAGAACC ACACCTCCCG GCGCGACGCC TTCGAGACGG TCGGCGGCGC ACCACTCGGC
CGCATCGACT ACGAGGCCGC GGCCGAGGCG GGCGCCGACG GCGACGCGGC CGACGCCGCC
ATCGAGTGGA CCCGCGATCC GCTCCCGCGG GGGGAGGACG CGGGCGAAGA CGGCGCCAGC
GTCGACCTCG AACCCGACCT CGACGGCGAC GTGGAACTGG TGAAGTTCAC GCCCGGCATG
GACCCGGCCG CGTGGGACTA TCTCGACAGC AAGGACGGCG TCGTGATCGA GGGAACCGGA
CTCGGCCACG TTCACACCGA CCTCATCCCG CGGATCGAGG CGCTGATCGA GAACGGGACC
GTCGTCGCGA TGACGAGCCA GTGTCTCGCC GGCCGCGTCT GCGACCGGGT GTACGACACC
GGCCGCGATC TGCTCGACGC CGGCGTCGTC GAGGCGGGCG ACACCCTCCC CGGCACCGCG
AAGGTGAAGC TGATGTGGGC GCTCGCGAAC CTGTCCGACC CCGCCGAGGC GATGGGGCGC
GACCTCGCCG GCGAGCTGAC CGAGGAGTCA CAGCCCTGGC GATGA
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| Protein sequence | MQPGDRVRVD RGDVTNEGVL LPSTTHDHLV VKLDGGYNVG IDRDEADVEV LESGARDVDE
GADAGGGEAS EITFDGDLPT ISLISTGGTI ASTVDYRTGA VTAQFDAEDV LRAVPDLAGR
ANYRGRVVAN ILSENMEPPI WQELAEAVRE EIAAGADGVV VMHGTDTMQY SASALSFMLD
SPVPIVFTGS QRSADRPSSD NVMNAVCAVE AAKADHAETL VCMHASQSDD ACALHRGTRV
RKNHTSRRDA FETVGGAPLG RIDYEAAAEA GADGDAADAA IEWTRDPLPR GEDAGEDGAS
VDLEPDLDGD VELVKFTPGM DPAAWDYLDS KDGVVIEGTG LGHVHTDLIP RIEALIENGT
VVAMTSQCLA GRVCDRVYDT GRDLLDAGVV EAGDTLPGTA KVKLMWALAN LSDPAEAMGR
DLAGELTEES QPWR
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