Gene Hlac_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2062 
Symbol 
ID7402081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2052187 
End bp2052645 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID643709133 
Producthypothetical protein 
Protein accessionYP_002566710 
Protein GI222480473 
COG category[R] General function prediction only 
COG ID[COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00995263 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.160551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTC TCGACACCTC GGCGTTTATT CACGAGTACA CCACCGACGA CACTGTCGTC 
TCGGTGCCCG AAGTGCACGA AGAGCTCACC GGCGAGGGAG CGCTCCGCTT CGACGCGATG
GAGGGCTCCG GCATGACGAT CCACGTCCCG GCCCCCGAAG TCCTCGACAA CGTGCGGCGC
GCTGCGCGCG GGTCCGGCGA CGCCGCGGAG CTGTCCGACA CCGACACCCG GCTGATCGCG
ACCGCGCTTG AGCTGAGCGC GACGCTCGTC ACCGACGACT ACGCGATGCA AAACGTCGCC
GAGCGACTCG ACATCTCCGT CGAAGCGATT GCACGCGACG GGATCACGGA GGAGCGCGAA
TGGCGGTTCC AGTGCGTCGG CTGCAACCGG ACCTTCGACG AGAACAAAGA GCGGTGTCCG
ATCTGCGGAA GCGACCTGAC GCGGAAGAAC CCGGCGTAA
 
Protein sequence
MEVLDTSAFI HEYTTDDTVV SVPEVHEELT GEGALRFDAM EGSGMTIHVP APEVLDNVRR 
AARGSGDAAE LSDTDTRLIA TALELSATLV TDDYAMQNVA ERLDISVEAI ARDGITEERE
WRFQCVGCNR TFDENKERCP ICGSDLTRKN PA