Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2055 |
Symbol | |
ID | 7402074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2046196 |
End bp | 2046948 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643709126 |
Product | ABC transporter related |
Protein accession | YP_002566703 |
Protein GI | 222480466 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.351163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0720953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCGGG CGACCGGCGT CTCGCAGTCG TTCGGCGGCG AGCGGGTGTT CGACGACCTC TCCATCGAGA TCGACGCCGG CGAGGTCCTC GGCGTCATCG GTCCTTCCGG CGTCGGCAAA ACGACGCTGC TTCGGACGCT CGCGCTCTCG CTCGAACCCG ACGCGGGGAC CGTCGACCTC GGCGGCACGG ACGCGTGGAC CGTCGAGGAG TCGGACCGAC TCGCCCTGCG GCGGCGGGTC GGAATGGTCT TTCAGGAGGC GAGCCTCTTC GACGCCTCGG TGGGCCGCAA CGTCGAATAC GGGCTCCGGG TTCGGAGCCC GTGGGCCGAC CGGATCGCCG CGACGCTGGG GCTCGCCGAG ACTCCCGACG CGGTTCGCGA GTCGCTCGAT GTCGTCGGGC TGACCGACAA GACGACTCAA CACGCCGACT CGCTGTCGGG CGGAGAGGCC CAGCGCGTGT CGTTCGCTCG CGCGCTGGCG TACGACCCGG ACGTGCTCCT GTTGGACGAG CCCACCTCCG ACCTCGACCC GCGGAACACG GCCGTCATCG AGGAGGCGAT CGACGAGGCC CAAACCCGGG GCATCGGCGT CGTCGTGGCG ACCCACGACA TGCATCAGGC GGAGCGCGTC GCGGACCGCG TCGCCGTCCT GCTCGACGAC GGGATCACGG AGGTCGGCCC GACGGAGCGG ATCTTCGAGA ACCCGTCCGA CGAGCGCACC CGGAAGTTCA TCTCGGGCGA GCTTGTGTAC TGA
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Protein sequence | MLRATGVSQS FGGERVFDDL SIEIDAGEVL GVIGPSGVGK TTLLRTLALS LEPDAGTVDL GGTDAWTVEE SDRLALRRRV GMVFQEASLF DASVGRNVEY GLRVRSPWAD RIAATLGLAE TPDAVRESLD VVGLTDKTTQ HADSLSGGEA QRVSFARALA YDPDVLLLDE PTSDLDPRNT AVIEEAIDEA QTRGIGVVVA THDMHQAERV ADRVAVLLDD GITEVGPTER IFENPSDERT RKFISGELVY
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