Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1948 |
Symbol | |
ID | 7399900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1948657 |
End bp | 1949235 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643709019 |
Product | protein of unknown function DUF1684 |
Protein accession | YP_002566596 |
Protein GI | 222480359 |
COG category | [S] Function unknown |
COG ID | [COG3358] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.483598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA CGACCCCCGA TGACGACTGG GCCGCACAGA TCGAGGCACA GCGGCGGGCG AAACACGAGC ACTTTCGCGA CTCCGCGCGG TCCCCGCTCC CGGCGTCGAT GCGAGGCGAC GCCTTCCCCG GACTGGCGTA CTTCGACCCG GACCCGGCGT ACCGGTTCGT CGTCCCGCTT CACGAACACG ACGAGAAGGA GACCGTGACC GTTGAGACGA CCGCCGACGG CGAGCAGACG TACCGTCGCT GGGGGGAGTT TCGGCTCGAA ATCGACGGCG AGACCGTAAC GCTGCAGGCG TATCGCCCCA CCGACGGCGC CGACCGCTTC TGGGTGCCCT TCCGCGACGA GACGAGCGGC GAGACGACGT ACGGCGCGGG GCGGTACCTC GATTTGGAGC CCGACCGTGA CCGCGTCGAC GGCGAGTGGG TGGTAGACTG TAACGTCGCG TACAACCCGA CGTGCGCGTA CAACCACGCG TACGAGTGCC CGCTCATCCC GATGGAAAAC TGGCTGGATG TGGCGATCGA AGCGGGCGAG AAGAAGTTCC CCGCCGAGCC CGCGGGTGCC GACCATTGA
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Protein sequence | MTETTPDDDW AAQIEAQRRA KHEHFRDSAR SPLPASMRGD AFPGLAYFDP DPAYRFVVPL HEHDEKETVT VETTADGEQT YRRWGEFRLE IDGETVTLQA YRPTDGADRF WVPFRDETSG ETTYGAGRYL DLEPDRDRVD GEWVVDCNVA YNPTCAYNHA YECPLIPMEN WLDVAIEAGE KKFPAEPAGA DH
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