Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1764 |
Symbol | thrS |
ID | 7399636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1780411 |
End bp | 1782360 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643708829 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_002566413 |
Protein GI | 222480176 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0076873 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGAGA CCGATGCGCA GGCCGACGTG ACGGTCGTCC TTCCGGACGG AGCAGAGCTC GACGTGCCGG CGGGGGCGAC AGTCGAAGAC GTTGCCTTCG AGATCGGCCC CGGGCTCGGT CGCGACACGG TCGCGGGGAA GATCGACGGC GAACTCGTCG AAAAGTACGC GACGGTCCAC GACGGCGCAC GGATCGAGAT CGTCACGGAT CAGTCCGACG AGTACCTCAC GGTGTTGCGC CACTCCGCCG CCCACGTGTT CGCGCAGGCC CTCCAGCGGC TCCATCCCGA AGCGACGCTC ACGATCGGCC CCCCGACCGA CGAGGGGTTC TACTACGACG TGACCGACGT CGACCTCGAC GAGGACGACC TCGACGCCAT CGAGGAGGAG ATGGACGAGA TCATCGCGGC CGACTACGAC ATTGAGCGCG AGGTCCGGTC CCGTGAGGAG GCCAAAGAGA TCTACGCCGA CAACGAGTAC AAACTGCAGA TACTCGACGA GGAAGCCGAC GACGAGGAGG TCACCTTCTA CGTGCAGGAC GACTGGCAGG ACCTCTGTCA GGGCCCCCAC GTCGAGTCGA CGGGCGAGAT CGGGGCGACG ACCCTCTTGG AGGTCTCGGC GGCCTACTGG CGCGGTGACG AGGACAACGA CACGCTGACG CGCGTGTACG GGACGGCGTT CGCCTCTGAA TCGGATCTGA AAGAGCATCT CGAACTGCGC GAGGAGGCGT TAGAGCGCGA CCACCGGAAG ATCGGACAGG AGATGAACCT CTTCTCGATC CCGACGGTGA CCGGTCCCGG CCTCCCGCTG TACCACCCGC CGGGCAAGAC CGTGCTCCGT GAACTCTCGA ACTTCGCGAA CGAGCTCAAC CGCGAGAACG GCTACGAGGA GGTCGAGACC CCGCACGTGT TCCGGACGGA GCTGTGGAAG AAGTCCGGCC ACTACGAGAA CTACAAAGAC GACATGTTCC TCCTCGACGT CAACGACGAG GAGTACGGGC TCAAGCCGAT GAACTGTCCG GGCCACGCGA CCATCTTCGA CCAGCAGTCG TGGTCGTACC GCGACCTGCC GCAGCGCTAC TTCGAGAACG GGAAGGTGTA CCGGAAAGAG CAGCGCGGCG AGCTCTCCGG GCTCTCGCGC GTCTGGTCGT TCACCATCGA CGACGGGCAC CTGTTCGTCC GGCCCGACCA GATCCGTCAG GAGATCGAGT CGGTCATCGA GATGATCTTC GAGGTCGTCG AGACGCTGGA TCTGGACGTC GAGGTCGCGC TGGCGACCCG CCCCGACAAA TCCGTCGGCG GCGACGAGAT CTGGGAGTCC GCGGAAGAGC AGCTCCGCGA CGTGCTCGAA TCGGGCGGCT ACGAGTACGA CGTCGAGCCC GGCGACGGCG CCTTCTACGG CCCGAAGATC GACTTCGGCT TTGAGGACGC GCTGGGTCGC GTCTGGGACG GCCCCACCGT CCAGCTCGAC TTCAACATGC CCGACCGGTT CGACCTGACC TACACGGGCG AGGACAACGA AGACCACCAG CCGGTGATGA TCCACCGCGC GCTGTACGGG AGCTACGAGC GCTTCTTCAT GGTGCTCATC GAGCACTTCG ACGGCGACTT CCCGCTGTGG CTCGCGCCCG AACAGGTCCG CATCCTCCCC GTCTCCGACG AGACGCTCGG CTACGCCCAC CGCGTGAAAA ACGAACTGGA GGACGCCGGC TTCCGCGTCG AGGTCGAGGA CCGCGACTGG ACGGTCGGTC GCAAGATCCG CGCCGGTCAC GACGACCGGC TCCCGTACAT GGTCATCGTC GGCGAGGACG AGCAGGAGGC GGGCACCGTC TCGGTCCGTG ACCGCTTCGA GAACCAACGC GGCGATGTCG ACCTCGACGC GTTCGTCGAC CACCTCGTCG CCGAGCGCGA CGAGAAGCGT ACTGAGCCGG AGTTCGTCGA CGCGGAGTGA
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Protein sequence | MSETDAQADV TVVLPDGAEL DVPAGATVED VAFEIGPGLG RDTVAGKIDG ELVEKYATVH DGARIEIVTD QSDEYLTVLR HSAAHVFAQA LQRLHPEATL TIGPPTDEGF YYDVTDVDLD EDDLDAIEEE MDEIIAADYD IEREVRSREE AKEIYADNEY KLQILDEEAD DEEVTFYVQD DWQDLCQGPH VESTGEIGAT TLLEVSAAYW RGDEDNDTLT RVYGTAFASE SDLKEHLELR EEALERDHRK IGQEMNLFSI PTVTGPGLPL YHPPGKTVLR ELSNFANELN RENGYEEVET PHVFRTELWK KSGHYENYKD DMFLLDVNDE EYGLKPMNCP GHATIFDQQS WSYRDLPQRY FENGKVYRKE QRGELSGLSR VWSFTIDDGH LFVRPDQIRQ EIESVIEMIF EVVETLDLDV EVALATRPDK SVGGDEIWES AEEQLRDVLE SGGYEYDVEP GDGAFYGPKI DFGFEDALGR VWDGPTVQLD FNMPDRFDLT YTGEDNEDHQ PVMIHRALYG SYERFFMVLI EHFDGDFPLW LAPEQVRILP VSDETLGYAH RVKNELEDAG FRVEVEDRDW TVGRKIRAGH DDRLPYMVIV GEDEQEAGTV SVRDRFENQR GDVDLDAFVD HLVAERDEKR TEPEFVDAE
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