| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1683 |
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| Symbol | |
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| ID | 7400440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1702296 |
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| End bp | 1704167 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643708752 |
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| Product | peptidase M50 |
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| Protein accession | YP_002566338 |
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| Protein GI | 222480101 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.200321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC TGACGGACCT GTTCGCCGAG AACACGCTGT TGTGGGTCCT CACGGGGGTC
CTCGCGTACT CCGCGGCCGC GATGTGGCTT CGGAACCGCG GGGCCCTCCC CGACTCTGTC
CGCGTCTCCG GACCTGTATT GACCCTCCGC ACCCTCCGTG GTCGAGCGTT CCTCGACCGG
CTCGCCGCGC CGAAGCGTCT CTGGCGGGCC GTCGCGAACC TCGGACTCGG CGGTGCGCTC
GTCGCGATGG TGGGATCGTT CATCCTCATC CTCTCATCGG CGCTCTCGGC GATTCGCACC
GTCCAGCCCT CCGCGATCCA ACAGCCGCAG AACTTCCTCA TTATCCCCGG CGTGAACGAC
TTCCTCCCCC TGTCGGTCGC ACCCGAGATC GTCGCCGGGC TCGCGGTCGC GATGGTCGTC
CACGAGGGGG CACACGGCCT GCTGTGCCGC GTCGAGGGGA TCGACATCGA GTCGATGGGG
CTCGTCTTCT TCACGTTCCT CCCCGTCGGC GCCTTCGTCG AGCCGAACGA GGAGGCGACC
CAGGAGGTCT CCCGCGGCGC CCGTGCCCGG ATGTTCGCCG CCGGCGTCAC CGCGAACACG
GTCCTCACGG TCCTCGTCTT CGCGCTGCTT TTCGGTCCGG TCGTCGGCGC CATCGCGCCG
GCGCCCGGCT ACGCCGTTGG CGAGGTGACC CCCGAGTCGC CGGCCGCAGC GGCCGATATC
GCGCACGGCG ACCGGTTGGT CGCGGTCGCG GGGACGCCGG TCGACACCGC GGACGAGTTC
GAGGCCGCGA TCGCCGACGC CGGCGAGACG GTGAGCGTCA CGGCCGACGA CGGTGACGGA
GAGCGGACCG TCGAGGTTGA GCGCCGGCTC CACGTGATCG GGTCCGCAGG TGGGAACCCG
CTCGGCGTGA CGATCGAGTC GGAGCCGGTG GCGATCACGT CCGTCAACGG CGAGTCCGTG
GCGACCGAGC AACAGTTCCT CGACGCCGTC GGCGACGCCG AGCGCGCGAC GGTGACCGTC
GACGCCGACG GCGCGGCCAA CGCCACGATC GATTCCGAGA CGACCGAGAT CCCGATCGGT
GCGTACGCCC TCGGCGTGCA GGAGGACGGG CCGCTTCACG CCGAGGGTGC GCCCCTCGGT
GAGCCGCTGA CGATCGTCTC GATCGACGGG GAGCGCGTCC GGAATAACGA CGAGCTCTCG
GCAGTGCTCG GCGAGCGCGA GCCCGGAACG ACCGCCGAGG TCGTCGCGTA CGACGCCGAC
GACGAGCGCG TCAGCTACGA CGTTGAGCTC GACTCGCACC CGAACCGCGA CGGCGGGTTC
ATCGGCGTGG GCGTCTTCCC CGGCTCCAGC GGACTCGCGC TCGACGACTT CGGCGTCTCG
GAGTACCCGG CCGGCGCGTA CCTCGAACTG CTCGGCGGCG ACGGCGGCGA GGGTGCGACC
AACGGGCTCG CGCTCACCGG GCTCACGGAC TCCCCGCTCG GGCTCGTGTT CGCCTCGCTC
ATCCTCCCGC TCGGCAGCCT GTTCGGGCTC CCGTTCAACT TCGCGGGATT CACCGGCGAG
ATGACCAACT TCTACGTGGT TGAGGGCGCG TTCGCCGCCT TCGGCGGCGG GACGTTCCTG
CTCGCGAACC TCCTCTTCTG GACCGGGTGG ATCAACATCC AGCTCGCGCT GTTCAACTGC
CTGCCGGCGT TCCCGCTCGA CGGGGGCCGC ATCCTTCGGA TGGTCGCCGA GGCGGTGGTC
AGCCGGGTCC CGATCTCCGA CCGGCATGCC GCGGTCCGAA CGATCACAGT CTCCTCCGGG
CTCGTGATGC TCGCCGGGCT GATCATGATG ATCTTCGGCA ACCAGATCCT CGGGGCGCTC
GGGCTGCTCT AG
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| Protein sequence | MNALTDLFAE NTLLWVLTGV LAYSAAAMWL RNRGALPDSV RVSGPVLTLR TLRGRAFLDR
LAAPKRLWRA VANLGLGGAL VAMVGSFILI LSSALSAIRT VQPSAIQQPQ NFLIIPGVND
FLPLSVAPEI VAGLAVAMVV HEGAHGLLCR VEGIDIESMG LVFFTFLPVG AFVEPNEEAT
QEVSRGARAR MFAAGVTANT VLTVLVFALL FGPVVGAIAP APGYAVGEVT PESPAAAADI
AHGDRLVAVA GTPVDTADEF EAAIADAGET VSVTADDGDG ERTVEVERRL HVIGSAGGNP
LGVTIESEPV AITSVNGESV ATEQQFLDAV GDAERATVTV DADGAANATI DSETTEIPIG
AYALGVQEDG PLHAEGAPLG EPLTIVSIDG ERVRNNDELS AVLGEREPGT TAEVVAYDAD
DERVSYDVEL DSHPNRDGGF IGVGVFPGSS GLALDDFGVS EYPAGAYLEL LGGDGGEGAT
NGLALTGLTD SPLGLVFASL ILPLGSLFGL PFNFAGFTGE MTNFYVVEGA FAAFGGGTFL
LANLLFWTGW INIQLALFNC LPAFPLDGGR ILRMVAEAVV SRVPISDRHA AVRTITVSSG
LVMLAGLIMM IFGNQILGAL GLL
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