Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1662 |
Symbol | |
ID | 7399613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1682277 |
End bp | 1683695 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643708730 |
Product | putative circadian clock protein, KaiC |
Protein accession | YP_002566317 |
Protein GI | 222480080 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.628139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACG AGGACGACTG GTTCGAGCGC GCGTTGCGGG ACAGCGACGC GGACAGCGAT GCGGCCGAGG GCGACGAGGA CGACGAGACC GGCGAAAGCA ACGAGGACGA CGAGACCGCC AACGGAGACG AACCTCCGGC CCGCGAAGCG TCCGATCCCG GGGGAGGCGA CGACCGCGCG GACGAGCGCG GAAGCGACCC GTTCGGCGGA ATCCGGAACG GCGAGCGGGA TCCGTCGCGA GAGGCCGGGG ACGACGTCGA TGAGGACAAC TTCGCCGGAG ACGTATTCGG CAGTACCGAG TCTGAGAGTG ACTCGCCGAA AAGCGACCTG CCGGAGGGAG ACGATCCGTT CGGCGGCGAG TCGTTTGGCG GCGACGACCC GTTCGGTGGC GGATCGTTCG GCGAGGAGGA CCCGTTTGGC GACGAGTCAG CGAATGACGG TACCCCCGAT CCGACCGGTT CTGGAGGGGG ATTCGGCGGC GGGTTGTTCG GGGACGACGA TCCCTTTGAC GGCGGGTCAG CGGGCAGCGG ATCAGCGGGC GGCGGGTCAG CGGGCAGTAA GTCCACTGAC AGCGGATCGG CAGACCCCTT CGGCGGGTAT CGGGGGAACG CCGCAGGCGA CTCCAGTGGG CCGAACGATG TCGGATTCGG TGAGTTCGAC GGCGGAGAGG GTGGCGGTGC GTCGCCGGGG TTCGACGTCG ATCCCGACGA GTTCGAGTCG TCGATCGAAC GCACCGACAT CGGAATCGAG GGGCTCGACG AGATGATCCT CGGCGGGGTC CCGCGTCGCT CGCTGTTGTC GGTCATCGGC GGTGCCGGGA CCGGGAAGAC GACGTTCGCG CTCCAATTCC TTAACGAGGC GCTCGAATCC GACCGGAAGG GAGTGTACAT CACCCTCGAA CAGACCCGCG AGTCGATCCT CTCGACGGCC GAGGAGAAGG GGTGGTCGTT CCGCGAGCAC GCCGAGGCGG ACCGGCTCGC GGTGGTCGCC ATCGACCCGA TCGAGATGGC GAACTCGCTG GCGTCGATCC GGAATGACCT CACGCGACTC ATCGCCGAGT TCGACGCCGA CCGGCTGGTG CTCGACTCCG TCTCGCTGCT GGAGATGATG TACGACCACC CGGCGAAGCG CCGCTCGGAG GTGTTCGGGT TCACCCGCTC GTTAAAAGAG GCCGGCGTCA CCACCCTGCT TACCTCGGAG GCGAACGAGA AGAACCCCTA CGCCTCCCGC CACGGGATCG TCGAGTACCT CACCGACGCG GTGTTCGTGC TCCAGTACAT CCGCGGTACC GACTTCCGCG AGATGCGCCT CGCCGTCGAG ATCCAGAAAA TCCGCGACGC GAACCACTCT CGGCAGTCGA AGCCGTACGA GATCACCGAC ACCGGGATAT CGGTGTACGG ACAGGCGAAC ATCTTCTGA
|
Protein sequence | MSDEDDWFER ALRDSDADSD AAEGDEDDET GESNEDDETA NGDEPPAREA SDPGGGDDRA DERGSDPFGG IRNGERDPSR EAGDDVDEDN FAGDVFGSTE SESDSPKSDL PEGDDPFGGE SFGGDDPFGG GSFGEEDPFG DESANDGTPD PTGSGGGFGG GLFGDDDPFD GGSAGSGSAG GGSAGSKSTD SGSADPFGGY RGNAAGDSSG PNDVGFGEFD GGEGGGASPG FDVDPDEFES SIERTDIGIE GLDEMILGGV PRRSLLSVIG GAGTGKTTFA LQFLNEALES DRKGVYITLE QTRESILSTA EEKGWSFREH AEADRLAVVA IDPIEMANSL ASIRNDLTRL IAEFDADRLV LDSVSLLEMM YDHPAKRRSE VFGFTRSLKE AGVTTLLTSE ANEKNPYASR HGIVEYLTDA VFVLQYIRGT DFREMRLAVE IQKIRDANHS RQSKPYEITD TGISVYGQAN IF
|
| |