| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1620 |
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| Symbol | |
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| ID | 7399569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1640278 |
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| End bp | 1641249 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643708686 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002566275 |
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| Protein GI | 222480038 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.652805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG GTGTGCTAAC CGTCCCCTTA GGCGGCGAAT CGATCGACGA CGCGGTCGCG
TACCTCGACG ATATCGGCGT CGACGCCGTC GAACTCGGCG TCGGCGGGTG GCCCAGCGAG
GACCACGTCG ACCGCGAGGC GATACTCGAC GACGACGCGG CGCAGGCGGA GCTTCGGGAG
CTACTCGACG AACACGGCCT CCGGATCTCC GCGCTCGCGA CCCACAACAA CCCCCTCCAC
CCCGACGAGG AGCGCGCCGC GGCGGCCGAC CGAGAGCTCC GCGAGGCGAT CGAGCTTGCC
GACCAGCTGG ACGTGGGCAC GGTCACCTGT TTCTCCGGCC TTCCTGCCGG CGCGCCGGGC
GACTCGACGC CGAACTGGAT CACGGCGCCG TGGCCGAGCG AACACGCCGA CGCCCACGAG
TATCAATGGG ACGAGGTCGC GATCCCGTAC TGGACGGATC TGGCGAAACA CGCAGACCAC
CACGGGGTGG ATGTCGCCAT CGAGATGCAC CCGAACATGC TCGTGTACGA GCCGACCGGC
ATGCTCGCGC TCCGGGAGGC CACGAACGAG CGGATCGGCG CCAACTTCGA CCCCTCGCAC
CTCTACTGGC AGGGGATCGA CGTGATCGAG GCGATCCGAT TTTTGGGCGA CCACGACGCG
ATCCACCACT TCCACGCGAA GGACACCAAG GTGTACGACG CGAACGCGCG CGTGAAGGGC
GTACTCGACA CGACGAGCTA CACCGACGAG AGCGATCGCT CGTGGCTGTT CCGTTCGATC
GGTTACGGCC ACGACGAGAG CCACTGGAAG GACGTCGTCT CGACGCTCCG GATGGTCGGG
TACGAGGGCG CGCTGTCGAT CGAACACGAG GACTCGCTGA CCTCCTCGCG GGAGGGGTTA
GAGAAGGCGG TCGACGTGCT CGACCGCGCC GTCTTCGAGA CGCAACCGGG CGACGCCTAC
TGGGCGGAGT AA
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| Protein sequence | MDIGVLTVPL GGESIDDAVA YLDDIGVDAV ELGVGGWPSE DHVDREAILD DDAAQAELRE
LLDEHGLRIS ALATHNNPLH PDEERAAAAD RELREAIELA DQLDVGTVTC FSGLPAGAPG
DSTPNWITAP WPSEHADAHE YQWDEVAIPY WTDLAKHADH HGVDVAIEMH PNMLVYEPTG
MLALREATNE RIGANFDPSH LYWQGIDVIE AIRFLGDHDA IHHFHAKDTK VYDANARVKG
VLDTTSYTDE SDRSWLFRSI GYGHDESHWK DVVSTLRMVG YEGALSIEHE DSLTSSREGL
EKAVDVLDRA VFETQPGDAY WAE
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